Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm2855-201ENSMUST00000166765 456 ntBASIC6.06□□□□□ -1.44
Col18a1P39061 Gm20657-201ENSMUST00000177079 515 ntBASIC6.06□□□□□ -1.44
Col18a1P39061 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Col18a1P39061 Gm10421-203ENSMUST00000190266 781 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Col18a1P39061 Mirlet7e-201ENSMUST00000196737 93 ntBASIC6.06□□□□□ -1.44
Col18a1P39061 Gm43001-202ENSMUST00000199076 192 ntTSL 3 BASIC6.06□□□□□ -1.44
Col18a1P39061 Gm44032-201ENSMUST00000204841 166 ntBASIC6.06□□□□□ -1.44
Col18a1P39061 Ifitm6-202ENSMUST00000209328 678 ntAPPRIS P2 TSL 5 BASIC6.06□□□□□ -1.44
Col18a1P39061 Sult2a7-203ENSMUST00000210034 870 ntTSL 5 BASIC6.06□□□□□ -1.44
Col18a1P39061 Gm45269-201ENSMUST00000210359 282 ntBASIC6.06□□□□□ -1.44
Col18a1P39061 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC6.06□□□□□ -1.44
Col18a1P39061 AC131068.1-201ENSMUST00000226891 482 ntBASIC6.06□□□□□ -1.44
Col18a1P39061 Snora30-201ENSMUST00000083325 130 ntBASIC6.06□□□□□ -1.44
Col18a1P39061 Ascc3-206ENSMUST00000219226 1357 ntTSL 5 BASIC6.05□□□□□ -1.44
Col18a1P39061 Aadacl2-201ENSMUST00000169794 1590 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Col18a1P39061 Zfp932-207ENSMUST00000187241 1581 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
Col18a1P39061 Olfr194-203ENSMUST00000216519 3705 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Col18a1P39061 Vmn1r6-206ENSMUST00000227847 8073 ntAPPRIS P2 BASIC6.05□□□□□ -1.44
Col18a1P39061 Gm43185-201ENSMUST00000197507 2775 ntBASIC6.05□□□□□ -1.44
Col18a1P39061 Gm3629-201ENSMUST00000171706 1756 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Col18a1P39061 Btbd35f7-201ENSMUST00000105007 1960 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Col18a1P39061 Cntn6-205ENSMUST00000162872 3467 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Col18a1P39061 Kbtbd8-201ENSMUST00000032107 4869 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Col18a1P39061 Zscan4-ps3-201ENSMUST00000210559 2277 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Col18a1P39061 AW046200-203ENSMUST00000211787 2479 ntBASIC6.05□□□□□ -1.44
Col18a1P39061 Dnah11-201ENSMUST00000084806 14072 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Col18a1P39061 AC124446.1-201ENSMUST00000221027 2644 ntBASIC6.05□□□□□ -1.44
Col18a1P39061 Gm45235-201ENSMUST00000208016 4465 ntBASIC6.05□□□□□ -1.44
Col18a1P39061 B3galt1-201ENSMUST00000042456 2855 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Col18a1P39061 Gm39139-202ENSMUST00000212621 5878 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Col18a1P39061 Gm25764-201ENSMUST00000104092 134 ntBASIC6.05□□□□□ -1.44
Col18a1P39061 Gm24376-201ENSMUST00000104399 127 ntBASIC6.05□□□□□ -1.44
Col18a1P39061 Gm13550-201ENSMUST00000118185 525 ntBASIC6.05□□□□□ -1.44
Col18a1P39061 Gm15014-201ENSMUST00000120742 258 ntBASIC6.05□□□□□ -1.44
Col18a1P39061 Gm14587-201ENSMUST00000121714 658 ntBASIC6.05□□□□□ -1.44
Col18a1P39061 Gm11692-201ENSMUST00000122121 902 ntBASIC6.05□□□□□ -1.44
Col18a1P39061 Gm25104-201ENSMUST00000122476 163 ntBASIC6.05□□□□□ -1.44
Col18a1P39061 Gm1979-202ENSMUST00000170224 666 ntTSL 5 BASIC6.05□□□□□ -1.44
Col18a1P39061 Gm21698-201ENSMUST00000178487 666 ntTSL 5 BASIC6.05□□□□□ -1.44
Col18a1P39061 Rian-214ENSMUST00000183026 596 ntTSL 5 BASIC6.05□□□□□ -1.44
Col18a1P39061 Gm10292-201ENSMUST00000183142 581 ntBASIC6.05□□□□□ -1.44
Col18a1P39061 Gm18185-201ENSMUST00000186725 667 ntBASIC6.05□□□□□ -1.44
Col18a1P39061 Olfr151-201ENSMUST00000211893 1128 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Col18a1P39061 AC165146.1-201ENSMUST00000223777 900 ntBASIC6.05□□□□□ -1.44
Col18a1P39061 Olfr502-201ENSMUST00000078933 1059 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Col18a1P39061 Olfr1216-201ENSMUST00000099800 936 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Col18a1P39061 Olfr1382-202ENSMUST00000213152 4236 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Col18a1P39061 Gm36962-201ENSMUST00000192114 1761 ntBASIC6.05□□□□□ -1.44
Col18a1P39061 Slfn4-203ENSMUST00000215472 1830 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Col18a1P39061 Gm35629-201ENSMUST00000209684 2241 ntBASIC6.05□□□□□ -1.44
Col18a1P39061 Olfr822-202ENSMUST00000216879 2663 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Col18a1P39061 Slc5a12-201ENSMUST00000045972 3529 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Col18a1P39061 Pcdh9-208ENSMUST00000195826 6521 ntAPPRIS P3 TSL 5 BASIC6.05□□□□□ -1.44
Col18a1P39061 Prox1-202ENSMUST00000175916 7913 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Col18a1P39061 Specc1-201ENSMUST00000049836 6091 ntTSL 5 BASIC6.04□□□□□ -1.44
Col18a1P39061 Gm38106-201ENSMUST00000194107 2534 ntBASIC6.04□□□□□ -1.44
Col18a1P39061 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC6.04□□□□□ -1.44
Col18a1P39061 Slc31a1-202ENSMUST00000122092 4154 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Col18a1P39061 Gm15128-202ENSMUST00000178833 1350 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Col18a1P39061 Gm23175-201ENSMUST00000104371 132 ntBASIC6.04□□□□□ -1.44
Col18a1P39061 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC6.04□□□□□ -1.44
Col18a1P39061 Gm12268-201ENSMUST00000118398 442 ntBASIC6.04□□□□□ -1.44
Col18a1P39061 Gm14887-201ENSMUST00000119522 663 ntBASIC6.04□□□□□ -1.44
Col18a1P39061 Gm14322-202ENSMUST00000119838 1077 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Col18a1P39061 Gm15885-201ENSMUST00000122114 388 ntBASIC6.04□□□□□ -1.44
Col18a1P39061 Gm14418-202ENSMUST00000128657 1077 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Col18a1P39061 4930451E10Rik-201ENSMUST00000130840 409 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Col18a1P39061 Igfl3-201ENSMUST00000152973 575 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Col18a1P39061 Gm23505-201ENSMUST00000158989 130 ntBASIC6.04□□□□□ -1.44
Col18a1P39061 Gm21860-201ENSMUST00000177893 309 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Col18a1P39061 Gm21748-201ENSMUST00000179623 309 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Col18a1P39061 Gm5798-202ENSMUST00000179987 582 ntTSL 3 BASIC6.04□□□□□ -1.44
Col18a1P39061 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC6.04□□□□□ -1.44
Col18a1P39061 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC6.04□□□□□ -1.44
Col18a1P39061 Gm7142-201ENSMUST00000194232 586 ntBASIC6.04□□□□□ -1.44
Col18a1P39061 Trav7-5-201ENSMUST00000200609 337 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Col18a1P39061 Gm44050-201ENSMUST00000204263 527 ntBASIC6.04□□□□□ -1.44
Col18a1P39061 Gm18320-201ENSMUST00000211304 595 ntBASIC6.04□□□□□ -1.44
Col18a1P39061 1810014B01Rik-204ENSMUST00000218536 204 ntBASIC6.04□□□□□ -1.44
Col18a1P39061 4930567K20Rik-203ENSMUST00000220108 646 ntTSL 5 BASIC6.04□□□□□ -1.44
Col18a1P39061 CT009713.9-201ENSMUST00000223604 389 ntBASIC6.04□□□□□ -1.44
Col18a1P39061 Olfr830-201ENSMUST00000078861 948 ntAPPRIS P2 BASIC6.04□□□□□ -1.44
Col18a1P39061 n-R5s160-201ENSMUST00000083096 120 ntBASIC6.04□□□□□ -1.44
Col18a1P39061 Gm25512-201ENSMUST00000083863 107 ntBASIC6.04□□□□□ -1.44
Col18a1P39061 Vmn1r34-204ENSMUST00000226999 3048 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Col18a1P39061 AC159193.1-201ENSMUST00000222872 2517 ntBASIC6.04□□□□□ -1.44
Col18a1P39061 AC122024.1-201ENSMUST00000219276 4850 ntBASIC6.04□□□□□ -1.44
Col18a1P39061 Olfr985-202ENSMUST00000214981 1879 ntAPPRIS P1 TSL 3 BASIC6.04□□□□□ -1.44
Col18a1P39061 Nusap1-202ENSMUST00000068225 2960 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
Col18a1P39061 Olfr656-202ENSMUST00000215575 4091 ntAPPRIS ALT2 TSL 3 BASIC6.04□□□□□ -1.44
Col18a1P39061 Gm38126-201ENSMUST00000195297 4003 ntBASIC6.04□□□□□ -1.44
Col18a1P39061 Olfr113-201ENSMUST00000216181 1671 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Col18a1P39061 AC160115.1-201ENSMUST00000224678 1574 ntBASIC6.04□□□□□ -1.44
Col18a1P39061 Gnpnat1-206ENSMUST00000227468 1490 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Col18a1P39061 Ikzf2-201ENSMUST00000027146 9278 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Col18a1P39061 Gm16246-201ENSMUST00000145464 1346 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Col18a1P39061 Gm25833-201ENSMUST00000104137 133 ntBASIC6.03□□□□□ -1.44
Col18a1P39061 Mir190b-201ENSMUST00000104803 80 ntBASIC6.03□□□□□ -1.44
Col18a1P39061 Gm10936-201ENSMUST00000105264 252 ntBASIC6.03□□□□□ -1.44
Col18a1P39061 Zfp972-202ENSMUST00000108934 561 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 149.8 ms