Protein–RNA interactions for Protein: Q3ULM6

Uspl1, SUMO-specific isopeptidase USPL1, mousemouse

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uspl1Q3ULM6 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
Uspl1Q3ULM6 Gm20472-201ENSMUST00000174403 1240 ntBASIC22.52■■□□□ 1.2
Uspl1Q3ULM6 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Uspl1Q3ULM6 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Uspl1Q3ULM6 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Uspl1Q3ULM6 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Uspl1Q3ULM6 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Uspl1Q3ULM6 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Uspl1Q3ULM6 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC22.52■■□□□ 1.2
Uspl1Q3ULM6 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC22.52■■□□□ 1.2
Uspl1Q3ULM6 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC22.52■■□□□ 1.2
Uspl1Q3ULM6 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Uspl1Q3ULM6 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.19
Uspl1Q3ULM6 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
Uspl1Q3ULM6 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
Uspl1Q3ULM6 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Uspl1Q3ULM6 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Uspl1Q3ULM6 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Uspl1Q3ULM6 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC22.51■■□□□ 1.19
Uspl1Q3ULM6 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC22.51■■□□□ 1.19
Uspl1Q3ULM6 Gm9731-201ENSMUST00000209480 747 ntBASIC22.51■■□□□ 1.19
Uspl1Q3ULM6 Il3ra-202ENSMUST00000223589 738 ntBASIC22.51■■□□□ 1.19
Uspl1Q3ULM6 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Uspl1Q3ULM6 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Uspl1Q3ULM6 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Uspl1Q3ULM6 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC22.51■■□□□ 1.19
Uspl1Q3ULM6 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Uspl1Q3ULM6 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Uspl1Q3ULM6 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Uspl1Q3ULM6 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Uspl1Q3ULM6 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
Uspl1Q3ULM6 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Uspl1Q3ULM6 Tfap2a-209ENSMUST00000225180 1828 ntBASIC22.5■■□□□ 1.19
Uspl1Q3ULM6 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Uspl1Q3ULM6 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Uspl1Q3ULM6 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Uspl1Q3ULM6 Gm7791-201ENSMUST00000219066 539 ntBASIC22.5■■□□□ 1.19
Uspl1Q3ULM6 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC22.5■■□□□ 1.19
Uspl1Q3ULM6 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Uspl1Q3ULM6 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Uspl1Q3ULM6 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
Uspl1Q3ULM6 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC22.5■■□□□ 1.19
Uspl1Q3ULM6 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Uspl1Q3ULM6 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC22.5■■□□□ 1.19
Uspl1Q3ULM6 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC22.5■■□□□ 1.19
Uspl1Q3ULM6 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Uspl1Q3ULM6 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Uspl1Q3ULM6 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Uspl1Q3ULM6 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Uspl1Q3ULM6 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC22.49■■□□□ 1.19
Uspl1Q3ULM6 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Uspl1Q3ULM6 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC22.49■■□□□ 1.19
Uspl1Q3ULM6 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
Uspl1Q3ULM6 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
Uspl1Q3ULM6 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Uspl1Q3ULM6 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC22.49■■□□□ 1.19
Uspl1Q3ULM6 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Uspl1Q3ULM6 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
Uspl1Q3ULM6 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Uspl1Q3ULM6 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Uspl1Q3ULM6 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Uspl1Q3ULM6 Gm42900-201ENSMUST00000197184 2167 ntBASIC22.49■■□□□ 1.19
Uspl1Q3ULM6 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC22.49■■□□□ 1.19
Uspl1Q3ULM6 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Uspl1Q3ULM6 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Uspl1Q3ULM6 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Uspl1Q3ULM6 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC22.48■■□□□ 1.19
Uspl1Q3ULM6 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC22.48■■□□□ 1.19
Uspl1Q3ULM6 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
Uspl1Q3ULM6 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Uspl1Q3ULM6 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Uspl1Q3ULM6 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
Uspl1Q3ULM6 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Uspl1Q3ULM6 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC22.48■■□□□ 1.19
Uspl1Q3ULM6 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Uspl1Q3ULM6 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Uspl1Q3ULM6 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
Uspl1Q3ULM6 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Uspl1Q3ULM6 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Uspl1Q3ULM6 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Uspl1Q3ULM6 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
Uspl1Q3ULM6 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Uspl1Q3ULM6 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
Uspl1Q3ULM6 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Uspl1Q3ULM6 Gm43353-201ENSMUST00000199224 1295 ntBASIC22.47■■□□□ 1.19
Uspl1Q3ULM6 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Uspl1Q3ULM6 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Uspl1Q3ULM6 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
Uspl1Q3ULM6 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Uspl1Q3ULM6 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Uspl1Q3ULM6 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Uspl1Q3ULM6 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC22.46■■□□□ 1.19
Uspl1Q3ULM6 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Uspl1Q3ULM6 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC22.46■■□□□ 1.19
Uspl1Q3ULM6 AC120002.2-201ENSMUST00000220205 773 ntBASIC22.46■■□□□ 1.19
Uspl1Q3ULM6 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Uspl1Q3ULM6 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Uspl1Q3ULM6 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Uspl1Q3ULM6 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Uspl1Q3ULM6 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms