Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm2026-202ENSMUST00000109008 1497 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Col18a1P39061 Gm4724-202ENSMUST00000109046 1497 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Col18a1P39061 Gm4631-201ENSMUST00000109050 1494 ntTSL 5 BASIC6.08□□□□□ -1.44
Col18a1P39061 Gm14434-203ENSMUST00000122097 1497 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Col18a1P39061 Gm11007-202ENSMUST00000178120 1497 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Col18a1P39061 Gm2007-202ENSMUST00000178133 1497 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Col18a1P39061 Gm11007-203ENSMUST00000185834 1494 ntTSL 5 BASIC6.08□□□□□ -1.44
Col18a1P39061 Gm2007-203ENSMUST00000189494 1494 ntTSL 5 BASIC6.08□□□□□ -1.44
Col18a1P39061 4933413L06Rik-201ENSMUST00000110292 809 ntTSL 2 BASIC6.08□□□□□ -1.44
Col18a1P39061 Gm14670-201ENSMUST00000117327 337 ntBASIC6.08□□□□□ -1.44
Col18a1P39061 Gm8666-201ENSMUST00000117517 292 ntBASIC6.08□□□□□ -1.44
Col18a1P39061 Gm14790-201ENSMUST00000117760 1293 ntBASIC6.08□□□□□ -1.44
Col18a1P39061 Gm29031-201ENSMUST00000185316 614 ntBASIC6.08□□□□□ -1.44
Col18a1P39061 Gm29000-201ENSMUST00000185444 614 ntBASIC6.08□□□□□ -1.44
Col18a1P39061 Gm28204-201ENSMUST00000185934 614 ntBASIC6.08□□□□□ -1.44
Col18a1P39061 Gm28290-201ENSMUST00000186505 614 ntBASIC6.08□□□□□ -1.44
Col18a1P39061 Gm28161-201ENSMUST00000186669 614 ntBASIC6.08□□□□□ -1.44
Col18a1P39061 Gm29216-201ENSMUST00000187117 492 ntBASIC6.08□□□□□ -1.44
Col18a1P39061 Gm28749-209ENSMUST00000189599 614 ntBASIC6.08□□□□□ -1.44
Col18a1P39061 Gm33163-201ENSMUST00000194504 614 ntBASIC6.08□□□□□ -1.44
Col18a1P39061 Gm43493-201ENSMUST00000199837 202 ntBASIC6.08□□□□□ -1.44
Col18a1P39061 Gm44449-201ENSMUST00000203610 153 ntBASIC6.08□□□□□ -1.44
Col18a1P39061 Gm8125-201ENSMUST00000216602 738 ntBASIC6.08□□□□□ -1.44
Col18a1P39061 Pbsn-201ENSMUST00000000003 902 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Col18a1P39061 Cr2-201ENSMUST00000043104 1044 ntTSL 5 BASIC6.08□□□□□ -1.44
Col18a1P39061 Gm24707-201ENSMUST00000082812 107 ntBASIC6.08□□□□□ -1.44
Col18a1P39061 Gm23516-201ENSMUST00000093728 107 ntBASIC6.08□□□□□ -1.44
Col18a1P39061 Gm42611-201ENSMUST00000199446 3407 ntBASIC6.08□□□□□ -1.44
Col18a1P39061 Xkrx-201ENSMUST00000033611 2876 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Col18a1P39061 Olfr736-205ENSMUST00000215263 2255 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Col18a1P39061 Gm45516-201ENSMUST00000211588 4182 ntBASIC6.07□□□□□ -1.44
Col18a1P39061 Usp29-204ENSMUST00000200535 7540 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Col18a1P39061 Ttc37-205ENSMUST00000224386 6976 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Col18a1P39061 Trim30b-205ENSMUST00000171830 2771 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Col18a1P39061 Zfp870-202ENSMUST00000228075 5222 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Col18a1P39061 Olfr270-201ENSMUST00000095084 2204 ntAPPRIS ALT1 TSL 5 BASIC6.07□□□□□ -1.44
Col18a1P39061 Olfr801-204ENSMUST00000216067 4014 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Col18a1P39061 Ankrd17-205ENSMUST00000197021 8067 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
Col18a1P39061 Gm16436-201ENSMUST00000121510 1607 ntBASIC6.07□□□□□ -1.44
Col18a1P39061 Gm24273-201ENSMUST00000102332 164 ntBASIC6.07□□□□□ -1.44
Col18a1P39061 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Col18a1P39061 Gm12638-201ENSMUST00000119531 298 ntBASIC6.07□□□□□ -1.44
Col18a1P39061 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC6.07□□□□□ -1.44
Col18a1P39061 4930401O12Rik-201ENSMUST00000153175 841 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Col18a1P39061 Gm16311-201ENSMUST00000161939 702 ntTSL 3 BASIC6.07□□□□□ -1.44
Col18a1P39061 Gm22911-201ENSMUST00000177920 107 ntBASIC6.07□□□□□ -1.44
Col18a1P39061 Gm7976-201ENSMUST00000181507 1242 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Col18a1P39061 Gm18350-201ENSMUST00000187395 955 ntBASIC6.07□□□□□ -1.44
Col18a1P39061 Obox4-ps7-201ENSMUST00000196144 505 ntBASIC6.07□□□□□ -1.44
Col18a1P39061 Rpl31-ps13-201ENSMUST00000060994 378 ntBASIC6.07□□□□□ -1.44
Col18a1P39061 Cept1-201ENSMUST00000039153 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Col18a1P39061 Pramef25-201ENSMUST00000105766 1684 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Col18a1P39061 Fancd2-201ENSMUST00000036340 5512 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
Col18a1P39061 Lama2-201ENSMUST00000092639 9614 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Col18a1P39061 Olfr807-203ENSMUST00000217106 1788 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Col18a1P39061 Gm13100-201ENSMUST00000117157 1439 ntBASIC6.07□□□□□ -1.44
Col18a1P39061 Erap1-201ENSMUST00000169114 5644 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Col18a1P39061 Gm10340-201ENSMUST00000170790 1755 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Col18a1P39061 Gm25879-201ENSMUST00000104330 107 ntBASIC6.06□□□□□ -1.44
Col18a1P39061 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC6.06□□□□□ -1.44
Col18a1P39061 Gm13532-201ENSMUST00000120373 240 ntBASIC6.06□□□□□ -1.44
Col18a1P39061 Gm11797-201ENSMUST00000121336 754 ntBASIC6.06□□□□□ -1.44
Col18a1P39061 Gm22242-201ENSMUST00000175224 118 ntBASIC6.06□□□□□ -1.44
Col18a1P39061 Gm20874-201ENSMUST00000178356 663 ntBASIC6.06□□□□□ -1.44
Col18a1P39061 Gm21744-201ENSMUST00000178403 662 ntBASIC6.06□□□□□ -1.44
Col18a1P39061 Spin2g-201ENSMUST00000178425 687 ntBASIC6.06□□□□□ -1.44
Col18a1P39061 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC6.06□□□□□ -1.44
Col18a1P39061 Gm44813-201ENSMUST00000207921 361 ntTSL 3 BASIC6.06□□□□□ -1.44
Col18a1P39061 Gm45387-201ENSMUST00000209792 632 ntBASIC6.06□□□□□ -1.44
Col18a1P39061 Fcf1-201ENSMUST00000021669 749 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Col18a1P39061 AC157494.1-201ENSMUST00000221127 549 ntTSL 5 BASIC6.06□□□□□ -1.44
Col18a1P39061 AC163631.1-201ENSMUST00000225041 598 ntBASIC6.06□□□□□ -1.44
Col18a1P39061 Olfr218-201ENSMUST00000057548 942 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Col18a1P39061 Olfr191-201ENSMUST00000078517 930 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Col18a1P39061 Gm23345-201ENSMUST00000083817 150 ntBASIC6.06□□□□□ -1.44
Col18a1P39061 Taar4-201ENSMUST00000092660 1044 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Col18a1P39061 Olfr1087-201ENSMUST00000099877 942 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Col18a1P39061 Unc13c-202ENSMUST00000184666 8796 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Col18a1P39061 Inpp4b-203ENSMUST00000109852 4095 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
Col18a1P39061 Vmn1r6-202ENSMUST00000226689 8453 ntAPPRIS P2 BASIC6.06□□□□□ -1.44
Col18a1P39061 Olfr1234-203ENSMUST00000137692 3827 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
Col18a1P39061 Gm15518-201ENSMUST00000127115 2108 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Col18a1P39061 Meg3-209ENSMUST00000146701 14548 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Col18a1P39061 Csnk1g1-201ENSMUST00000034949 7208 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Col18a1P39061 Dnm3os-201ENSMUST00000139662 7928 ntBASIC6.06□□□□□ -1.44
Col18a1P39061 Gm6162-201ENSMUST00000194870 2930 ntBASIC6.06□□□□□ -1.44
Col18a1P39061 Gm43266-201ENSMUST00000201049 1771 ntBASIC6.06□□□□□ -1.44
Col18a1P39061 4930516K23Rik-201ENSMUST00000074064 6133 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Col18a1P39061 Pou2f1-205ENSMUST00000111427 13050 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
Col18a1P39061 Klhl4-201ENSMUST00000040504 3584 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
Col18a1P39061 Olfr1507-203ENSMUST00000206062 2803 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
Col18a1P39061 Gm24127-201ENSMUST00000104110 130 ntBASIC6.06□□□□□ -1.44
Col18a1P39061 Gm11781-201ENSMUST00000118328 472 ntBASIC6.06□□□□□ -1.44
Col18a1P39061 Xlr3e-ps-201ENSMUST00000119644 682 ntBASIC6.06□□□□□ -1.44
Col18a1P39061 Gm7916-201ENSMUST00000120325 456 ntBASIC6.06□□□□□ -1.44
Col18a1P39061 Xlr3d-ps-201ENSMUST00000121687 658 ntBASIC6.06□□□□□ -1.44
Col18a1P39061 Gm15178-201ENSMUST00000132100 472 ntTSL 5 BASIC6.06□□□□□ -1.44
Col18a1P39061 Gm2020-201ENSMUST00000145242 579 ntBASIC6.06□□□□□ -1.44
Col18a1P39061 Gm12971-201ENSMUST00000154720 511 ntTSL 5 BASIC6.06□□□□□ -1.44
Col18a1P39061 Gm24847-201ENSMUST00000158032 108 ntBASIC6.06□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 181.8 ms