Protein–RNA interactions for Protein: Q3ULM6

Uspl1, SUMO-specific isopeptidase USPL1, mousemouse

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uspl1Q3ULM6 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
Uspl1Q3ULM6 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC22.6■■□□□ 1.21
Uspl1Q3ULM6 Gm37055-201ENSMUST00000191866 133 ntBASIC22.6■■□□□ 1.21
Uspl1Q3ULM6 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Uspl1Q3ULM6 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC22.6■■□□□ 1.21
Uspl1Q3ULM6 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC22.6■■□□□ 1.21
Uspl1Q3ULM6 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
Uspl1Q3ULM6 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
Uspl1Q3ULM6 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
Uspl1Q3ULM6 Gm7638-201ENSMUST00000121348 967 ntBASIC22.59■■□□□ 1.21
Uspl1Q3ULM6 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Uspl1Q3ULM6 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Uspl1Q3ULM6 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Uspl1Q3ULM6 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Uspl1Q3ULM6 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC22.59■■□□□ 1.21
Uspl1Q3ULM6 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC22.59■■□□□ 1.21
Uspl1Q3ULM6 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
Uspl1Q3ULM6 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC22.58■■□□□ 1.21
Uspl1Q3ULM6 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
Uspl1Q3ULM6 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Uspl1Q3ULM6 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Uspl1Q3ULM6 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Uspl1Q3ULM6 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Uspl1Q3ULM6 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Uspl1Q3ULM6 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Uspl1Q3ULM6 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC22.58■■□□□ 1.21
Uspl1Q3ULM6 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC22.58■■□□□ 1.21
Uspl1Q3ULM6 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Uspl1Q3ULM6 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Uspl1Q3ULM6 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
Uspl1Q3ULM6 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Uspl1Q3ULM6 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.2
Uspl1Q3ULM6 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
Uspl1Q3ULM6 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.2
Uspl1Q3ULM6 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Uspl1Q3ULM6 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
Uspl1Q3ULM6 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Uspl1Q3ULM6 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
Uspl1Q3ULM6 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Uspl1Q3ULM6 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Uspl1Q3ULM6 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC22.57■■□□□ 1.2
Uspl1Q3ULM6 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC22.57■■□□□ 1.2
Uspl1Q3ULM6 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Uspl1Q3ULM6 Gm17661-201ENSMUST00000170317 270 ntBASIC22.57■■□□□ 1.2
Uspl1Q3ULM6 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Uspl1Q3ULM6 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC22.57■■□□□ 1.2
Uspl1Q3ULM6 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Uspl1Q3ULM6 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Uspl1Q3ULM6 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Uspl1Q3ULM6 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Uspl1Q3ULM6 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Uspl1Q3ULM6 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Uspl1Q3ULM6 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Uspl1Q3ULM6 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC22.56■■□□□ 1.2
Uspl1Q3ULM6 Gm37025-201ENSMUST00000195159 829 ntBASIC22.56■■□□□ 1.2
Uspl1Q3ULM6 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Uspl1Q3ULM6 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Uspl1Q3ULM6 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Uspl1Q3ULM6 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Uspl1Q3ULM6 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Uspl1Q3ULM6 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Uspl1Q3ULM6 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Uspl1Q3ULM6 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Uspl1Q3ULM6 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
Uspl1Q3ULM6 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Uspl1Q3ULM6 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
Uspl1Q3ULM6 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC22.55■■□□□ 1.2
Uspl1Q3ULM6 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Uspl1Q3ULM6 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Uspl1Q3ULM6 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Uspl1Q3ULM6 Gm5417-201ENSMUST00000079706 384 ntBASIC22.55■■□□□ 1.2
Uspl1Q3ULM6 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Uspl1Q3ULM6 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Uspl1Q3ULM6 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Uspl1Q3ULM6 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
Uspl1Q3ULM6 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC22.54■■□□□ 1.2
Uspl1Q3ULM6 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Uspl1Q3ULM6 AC135963.1-201ENSMUST00000211640 717 ntBASIC22.54■■□□□ 1.2
Uspl1Q3ULM6 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Uspl1Q3ULM6 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Uspl1Q3ULM6 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Uspl1Q3ULM6 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Uspl1Q3ULM6 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Uspl1Q3ULM6 Gm6598-201ENSMUST00000202719 2615 ntBASIC22.53■■□□□ 1.2
Uspl1Q3ULM6 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Uspl1Q3ULM6 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Uspl1Q3ULM6 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Uspl1Q3ULM6 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Uspl1Q3ULM6 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC22.53■■□□□ 1.2
Uspl1Q3ULM6 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC22.53■■□□□ 1.2
Uspl1Q3ULM6 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Uspl1Q3ULM6 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
Uspl1Q3ULM6 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
Uspl1Q3ULM6 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Uspl1Q3ULM6 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Uspl1Q3ULM6 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Uspl1Q3ULM6 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
Uspl1Q3ULM6 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Uspl1Q3ULM6 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Uspl1Q3ULM6 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC22.52■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms