Protein–RNA interactions for Protein: P41230

Kdm5c, Lysine-specific demethylase 5C, mousemouse

Predictions only

Length 1,554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm5cP41230 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC25.41■■□□□ 1.66
Kdm5cP41230 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Kdm5cP41230 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Kdm5cP41230 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Kdm5cP41230 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Kdm5cP41230 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Kdm5cP41230 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC25.39■■□□□ 1.66
Kdm5cP41230 AC132104.2-201ENSMUST00000215011 266 ntBASIC25.39■■□□□ 1.66
Kdm5cP41230 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC25.39■■□□□ 1.66
Kdm5cP41230 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC25.39■■□□□ 1.66
Kdm5cP41230 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
Kdm5cP41230 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
Kdm5cP41230 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC25.39■■□□□ 1.66
Kdm5cP41230 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Kdm5cP41230 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC25.39■■□□□ 1.65
Kdm5cP41230 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC25.39■■□□□ 1.65
Kdm5cP41230 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Kdm5cP41230 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Kdm5cP41230 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Kdm5cP41230 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC25.38■■□□□ 1.65
Kdm5cP41230 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC25.38■■□□□ 1.65
Kdm5cP41230 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
Kdm5cP41230 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC25.38■■□□□ 1.65
Kdm5cP41230 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Kdm5cP41230 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Kdm5cP41230 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Kdm5cP41230 Gm37935-201ENSMUST00000192012 982 ntBASIC25.38■■□□□ 1.65
Kdm5cP41230 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC25.38■■□□□ 1.65
Kdm5cP41230 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Kdm5cP41230 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Kdm5cP41230 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC25.38■■□□□ 1.65
Kdm5cP41230 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC25.38■■□□□ 1.65
Kdm5cP41230 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Kdm5cP41230 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC25.38■■□□□ 1.65
Kdm5cP41230 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Kdm5cP41230 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Kdm5cP41230 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Kdm5cP41230 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC25.37■■□□□ 1.65
Kdm5cP41230 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC25.37■■□□□ 1.65
Kdm5cP41230 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Kdm5cP41230 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Kdm5cP41230 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC25.37■■□□□ 1.65
Kdm5cP41230 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC25.37■■□□□ 1.65
Kdm5cP41230 Gm9449-201ENSMUST00000207265 1011 ntBASIC25.37■■□□□ 1.65
Kdm5cP41230 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Kdm5cP41230 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
Kdm5cP41230 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Kdm5cP41230 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Kdm5cP41230 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC25.37■■□□□ 1.65
Kdm5cP41230 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Kdm5cP41230 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
Kdm5cP41230 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Kdm5cP41230 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Kdm5cP41230 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Kdm5cP41230 Gm43231-201ENSMUST00000202960 2258 ntBASIC25.36■■□□□ 1.65
Kdm5cP41230 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Kdm5cP41230 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC25.36■■□□□ 1.65
Kdm5cP41230 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Kdm5cP41230 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Kdm5cP41230 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC25.36■■□□□ 1.65
Kdm5cP41230 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Kdm5cP41230 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Kdm5cP41230 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Kdm5cP41230 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC25.35■■□□□ 1.65
Kdm5cP41230 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC25.35■■□□□ 1.65
Kdm5cP41230 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC25.35■■□□□ 1.65
Kdm5cP41230 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC25.35■■□□□ 1.65
Kdm5cP41230 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC25.35■■□□□ 1.65
Kdm5cP41230 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Kdm5cP41230 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Kdm5cP41230 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC25.35■■□□□ 1.65
Kdm5cP41230 Gm37374-201ENSMUST00000194954 1829 ntBASIC25.35■■□□□ 1.65
Kdm5cP41230 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Kdm5cP41230 Gm18206-201ENSMUST00000207027 926 ntBASIC25.35■■□□□ 1.65
Kdm5cP41230 AC161829.1-201ENSMUST00000220298 281 ntBASIC25.35■■□□□ 1.65
Kdm5cP41230 Rps4l-201ENSMUST00000071745 943 ntBASIC25.35■■□□□ 1.65
Kdm5cP41230 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
Kdm5cP41230 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC25.34■■□□□ 1.65
Kdm5cP41230 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Kdm5cP41230 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC25.34■■□□□ 1.65
Kdm5cP41230 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC25.34■■□□□ 1.65
Kdm5cP41230 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Kdm5cP41230 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC25.34■■□□□ 1.65
Kdm5cP41230 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Kdm5cP41230 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC25.34■■□□□ 1.65
Kdm5cP41230 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC25.34■■□□□ 1.65
Kdm5cP41230 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC25.34■■□□□ 1.65
Kdm5cP41230 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Kdm5cP41230 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Kdm5cP41230 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Kdm5cP41230 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Kdm5cP41230 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC25.33■■□□□ 1.65
Kdm5cP41230 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC25.33■■□□□ 1.65
Kdm5cP41230 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC25.33■■□□□ 1.64
Kdm5cP41230 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
Kdm5cP41230 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Kdm5cP41230 Gm19721-201ENSMUST00000195284 1764 ntBASIC25.32■■□□□ 1.64
Kdm5cP41230 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Kdm5cP41230 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Kdm5cP41230 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms