Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Tnfrsf1aP25118 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Tnfrsf1aP25118 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Tnfrsf1aP25118 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Tnfrsf1aP25118 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Tnfrsf1aP25118 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Tnfrsf1aP25118 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Tnfrsf1aP25118 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Tnfrsf1aP25118 Gm10602-201ENSMUST00000098239 609 ntBASIC14.66□□□□□ -0.06
Tnfrsf1aP25118 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Tnfrsf1aP25118 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Tnfrsf1aP25118 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC14.66□□□□□ -0.06
Tnfrsf1aP25118 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC14.66□□□□□ -0.06
Tnfrsf1aP25118 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC14.66□□□□□ -0.06
Tnfrsf1aP25118 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tnfrsf1aP25118 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC14.65□□□□□ -0.06
Tnfrsf1aP25118 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Tnfrsf1aP25118 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tnfrsf1aP25118 AC108858.1-201ENSMUST00000228461 1498 ntBASIC14.65□□□□□ -0.06
Tnfrsf1aP25118 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tnfrsf1aP25118 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tnfrsf1aP25118 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tnfrsf1aP25118 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tnfrsf1aP25118 Gm15847-201ENSMUST00000121417 1065 ntBASIC14.65□□□□□ -0.06
Tnfrsf1aP25118 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Tnfrsf1aP25118 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Tnfrsf1aP25118 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tnfrsf1aP25118 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tnfrsf1aP25118 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tnfrsf1aP25118 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC14.65□□□□□ -0.06
Tnfrsf1aP25118 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Tnfrsf1aP25118 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tnfrsf1aP25118 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Tnfrsf1aP25118 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Tnfrsf1aP25118 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Tnfrsf1aP25118 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tnfrsf1aP25118 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf1aP25118 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf1aP25118 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf1aP25118 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC14.64□□□□□ -0.07
Tnfrsf1aP25118 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf1aP25118 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf1aP25118 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf1aP25118 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf1aP25118 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf1aP25118 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf1aP25118 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf1aP25118 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Tnfrsf1aP25118 Gm10418-201ENSMUST00000100943 576 ntBASIC14.64□□□□□ -0.07
Tnfrsf1aP25118 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC14.64□□□□□ -0.07
Tnfrsf1aP25118 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf1aP25118 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf1aP25118 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC14.64□□□□□ -0.07
Tnfrsf1aP25118 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf1aP25118 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf1aP25118 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf1aP25118 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf1aP25118 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf1aP25118 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf1aP25118 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf1aP25118 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Tnfrsf1aP25118 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf1aP25118 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tnfrsf1aP25118 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tnfrsf1aP25118 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tnfrsf1aP25118 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Tnfrsf1aP25118 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Tnfrsf1aP25118 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC14.63□□□□□ -0.07
Tnfrsf1aP25118 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tnfrsf1aP25118 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Tnfrsf1aP25118 Gm2559-201ENSMUST00000201323 363 ntBASIC14.63□□□□□ -0.07
Tnfrsf1aP25118 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tnfrsf1aP25118 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tnfrsf1aP25118 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tnfrsf1aP25118 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tnfrsf1aP25118 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC14.63□□□□□ -0.07
Tnfrsf1aP25118 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tnfrsf1aP25118 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tnfrsf1aP25118 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Tnfrsf1aP25118 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tnfrsf1aP25118 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tnfrsf1aP25118 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tnfrsf1aP25118 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tnfrsf1aP25118 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Tnfrsf1aP25118 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tnfrsf1aP25118 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC14.63□□□□□ -0.07
Tnfrsf1aP25118 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Tnfrsf1aP25118 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Tnfrsf1aP25118 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Tnfrsf1aP25118 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tnfrsf1aP25118 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tnfrsf1aP25118 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tnfrsf1aP25118 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tnfrsf1aP25118 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tnfrsf1aP25118 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Tnfrsf1aP25118 Gm29791-202ENSMUST00000207888 369 ntBASIC14.62□□□□□ -0.07
Tnfrsf1aP25118 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Tnfrsf1aP25118 AC122769.4-201ENSMUST00000228166 901 ntBASIC14.62□□□□□ -0.07
Tnfrsf1aP25118 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tnfrsf1aP25118 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 71.9 ms