Protein–RNA interactions for Protein: Q78XR0

Trappc6a, Trafficking protein particle complex subunit 6A, mousemouse

Predictions only

Length 159 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trappc6aQ78XR0 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trappc6aQ78XR0 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trappc6aQ78XR0 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trappc6aQ78XR0 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trappc6aQ78XR0 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.37■□□□□ 0.37
Trappc6aQ78XR0 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trappc6aQ78XR0 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC17.37■□□□□ 0.37
Trappc6aQ78XR0 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trappc6aQ78XR0 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trappc6aQ78XR0 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trappc6aQ78XR0 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trappc6aQ78XR0 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
Trappc6aQ78XR0 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trappc6aQ78XR0 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trappc6aQ78XR0 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.36■□□□□ 0.37
Trappc6aQ78XR0 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trappc6aQ78XR0 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trappc6aQ78XR0 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Trappc6aQ78XR0 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trappc6aQ78XR0 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Trappc6aQ78XR0 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trappc6aQ78XR0 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trappc6aQ78XR0 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trappc6aQ78XR0 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trappc6aQ78XR0 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trappc6aQ78XR0 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
Trappc6aQ78XR0 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trappc6aQ78XR0 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.35■□□□□ 0.37
Trappc6aQ78XR0 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC17.35■□□□□ 0.37
Trappc6aQ78XR0 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17.35■□□□□ 0.37
Trappc6aQ78XR0 Gm29791-202ENSMUST00000207888 369 ntBASIC17.35■□□□□ 0.37
Trappc6aQ78XR0 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trappc6aQ78XR0 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trappc6aQ78XR0 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Trappc6aQ78XR0 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.35■□□□□ 0.37
Trappc6aQ78XR0 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Trappc6aQ78XR0 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trappc6aQ78XR0 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trappc6aQ78XR0 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trappc6aQ78XR0 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trappc6aQ78XR0 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Trappc6aQ78XR0 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trappc6aQ78XR0 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trappc6aQ78XR0 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trappc6aQ78XR0 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC17.34■□□□□ 0.37
Trappc6aQ78XR0 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trappc6aQ78XR0 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trappc6aQ78XR0 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trappc6aQ78XR0 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trappc6aQ78XR0 Gm27704-201ENSMUST00000185094 107 ntBASIC17.34■□□□□ 0.37
Trappc6aQ78XR0 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trappc6aQ78XR0 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.34■□□□□ 0.37
Trappc6aQ78XR0 Gm7370-201ENSMUST00000219471 767 ntBASIC17.34■□□□□ 0.37
Trappc6aQ78XR0 AC154471.1-201ENSMUST00000224418 436 ntBASIC17.34■□□□□ 0.37
Trappc6aQ78XR0 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trappc6aQ78XR0 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trappc6aQ78XR0 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trappc6aQ78XR0 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trappc6aQ78XR0 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trappc6aQ78XR0 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trappc6aQ78XR0 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Trappc6aQ78XR0 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.34■□□□□ 0.37
Trappc6aQ78XR0 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.37
Trappc6aQ78XR0 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trappc6aQ78XR0 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trappc6aQ78XR0 Tgds-204ENSMUST00000228543 1594 ntBASIC17.33■□□□□ 0.37
Trappc6aQ78XR0 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trappc6aQ78XR0 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trappc6aQ78XR0 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Trappc6aQ78XR0 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trappc6aQ78XR0 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trappc6aQ78XR0 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Trappc6aQ78XR0 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trappc6aQ78XR0 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trappc6aQ78XR0 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trappc6aQ78XR0 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trappc6aQ78XR0 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trappc6aQ78XR0 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trappc6aQ78XR0 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trappc6aQ78XR0 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trappc6aQ78XR0 Gm14464-201ENSMUST00000119658 1254 ntBASIC17.32■□□□□ 0.36
Trappc6aQ78XR0 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trappc6aQ78XR0 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trappc6aQ78XR0 Gm5587-201ENSMUST00000206270 674 ntBASIC17.32■□□□□ 0.36
Trappc6aQ78XR0 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC17.32■□□□□ 0.36
Trappc6aQ78XR0 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trappc6aQ78XR0 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.32■□□□□ 0.36
Trappc6aQ78XR0 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trappc6aQ78XR0 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trappc6aQ78XR0 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trappc6aQ78XR0 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.32■□□□□ 0.36
Trappc6aQ78XR0 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.32■□□□□ 0.36
Trappc6aQ78XR0 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Trappc6aQ78XR0 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trappc6aQ78XR0 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trappc6aQ78XR0 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trappc6aQ78XR0 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trappc6aQ78XR0 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
Trappc6aQ78XR0 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trappc6aQ78XR0 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms