Protein–RNA interactions for Protein: Q61116

Znf235, Zinc finger protein 235, mousemouse

Predictions only

Length 645 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf235Q61116 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Znf235Q61116 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.39■□□□□ 0.53
Znf235Q61116 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.39■□□□□ 0.53
Znf235Q61116 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Znf235Q61116 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Znf235Q61116 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Znf235Q61116 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Znf235Q61116 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.38■□□□□ 0.53
Znf235Q61116 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Znf235Q61116 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Znf235Q61116 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Znf235Q61116 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Znf235Q61116 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
Znf235Q61116 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Znf235Q61116 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Znf235Q61116 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Znf235Q61116 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Znf235Q61116 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Znf235Q61116 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Znf235Q61116 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.38■□□□□ 0.53
Znf235Q61116 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Znf235Q61116 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Znf235Q61116 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Znf235Q61116 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Znf235Q61116 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Znf235Q61116 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Znf235Q61116 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Znf235Q61116 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Znf235Q61116 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Znf235Q61116 AC134329.2-201ENSMUST00000217897 428 ntBASIC18.37■□□□□ 0.53
Znf235Q61116 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Znf235Q61116 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Znf235Q61116 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Znf235Q61116 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC18.37■□□□□ 0.53
Znf235Q61116 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Znf235Q61116 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Znf235Q61116 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Znf235Q61116 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Znf235Q61116 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Znf235Q61116 AC125311.2-201ENSMUST00000227477 1940 ntBASIC18.36■□□□□ 0.53
Znf235Q61116 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
Znf235Q61116 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Znf235Q61116 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Znf235Q61116 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Znf235Q61116 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Znf235Q61116 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Znf235Q61116 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Znf235Q61116 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Znf235Q61116 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.35■□□□□ 0.53
Znf235Q61116 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Znf235Q61116 Spsb2-203ENSMUST00000112473 1322 ntBASIC18.35■□□□□ 0.53
Znf235Q61116 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Znf235Q61116 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Znf235Q61116 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Znf235Q61116 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.34■□□□□ 0.53
Znf235Q61116 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Znf235Q61116 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Znf235Q61116 Gm10013-201ENSMUST00000106074 672 ntBASIC18.34■□□□□ 0.53
Znf235Q61116 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC18.34■□□□□ 0.53
Znf235Q61116 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC18.34■□□□□ 0.53
Znf235Q61116 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Znf235Q61116 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Znf235Q61116 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Znf235Q61116 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Znf235Q61116 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
Znf235Q61116 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Znf235Q61116 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Znf235Q61116 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Znf235Q61116 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Znf235Q61116 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Znf235Q61116 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Znf235Q61116 Gm13474-201ENSMUST00000122466 815 ntBASIC18.33■□□□□ 0.52
Znf235Q61116 Gm23634-201ENSMUST00000175071 91 ntBASIC18.33■□□□□ 0.52
Znf235Q61116 Gm22697-201ENSMUST00000175194 63 ntBASIC18.33■□□□□ 0.52
Znf235Q61116 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC18.33■□□□□ 0.52
Znf235Q61116 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC18.33■□□□□ 0.52
Znf235Q61116 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC18.33■□□□□ 0.52
Znf235Q61116 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Znf235Q61116 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Znf235Q61116 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Znf235Q61116 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Znf235Q61116 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Znf235Q61116 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Znf235Q61116 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Znf235Q61116 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC18.32■□□□□ 0.52
Znf235Q61116 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC18.32■□□□□ 0.52
Znf235Q61116 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Znf235Q61116 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Znf235Q61116 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Znf235Q61116 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Znf235Q61116 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Znf235Q61116 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
Znf235Q61116 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Znf235Q61116 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC18.32■□□□□ 0.52
Znf235Q61116 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Znf235Q61116 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Znf235Q61116 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Znf235Q61116 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC18.32■□□□□ 0.52
Znf235Q61116 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Znf235Q61116 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms