Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim43aQ3TL54 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim43aQ3TL54 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trim43aQ3TL54 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
Trim43aQ3TL54 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trim43aQ3TL54 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim43aQ3TL54 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim43aQ3TL54 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.62■□□□□ 0.57
Trim43aQ3TL54 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC18.62■□□□□ 0.57
Trim43aQ3TL54 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Trim43aQ3TL54 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trim43aQ3TL54 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim43aQ3TL54 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim43aQ3TL54 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim43aQ3TL54 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC18.61■□□□□ 0.57
Trim43aQ3TL54 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim43aQ3TL54 Gm45774-201ENSMUST00000211992 2665 ntBASIC18.61■□□□□ 0.57
Trim43aQ3TL54 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim43aQ3TL54 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim43aQ3TL54 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim43aQ3TL54 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim43aQ3TL54 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Trim43aQ3TL54 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trim43aQ3TL54 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim43aQ3TL54 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC18.61■□□□□ 0.57
Trim43aQ3TL54 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim43aQ3TL54 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Trim43aQ3TL54 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trim43aQ3TL54 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Trim43aQ3TL54 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Trim43aQ3TL54 Gm12933-201ENSMUST00000120203 872 ntBASIC18.6■□□□□ 0.57
Trim43aQ3TL54 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim43aQ3TL54 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim43aQ3TL54 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim43aQ3TL54 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim43aQ3TL54 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim43aQ3TL54 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim43aQ3TL54 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim43aQ3TL54 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim43aQ3TL54 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim43aQ3TL54 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Trim43aQ3TL54 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Trim43aQ3TL54 Gm45412-201ENSMUST00000210217 2275 ntBASIC18.6■□□□□ 0.57
Trim43aQ3TL54 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim43aQ3TL54 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trim43aQ3TL54 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim43aQ3TL54 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim43aQ3TL54 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim43aQ3TL54 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim43aQ3TL54 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.59■□□□□ 0.57
Trim43aQ3TL54 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Trim43aQ3TL54 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.59■□□□□ 0.57
Trim43aQ3TL54 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim43aQ3TL54 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.59■□□□□ 0.57
Trim43aQ3TL54 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim43aQ3TL54 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim43aQ3TL54 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim43aQ3TL54 Haglr-201ENSMUST00000100000 2085 ntBASIC18.59■□□□□ 0.57
Trim43aQ3TL54 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC18.59■□□□□ 0.57
Trim43aQ3TL54 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim43aQ3TL54 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim43aQ3TL54 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim43aQ3TL54 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trim43aQ3TL54 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Trim43aQ3TL54 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Trim43aQ3TL54 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trim43aQ3TL54 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Trim43aQ3TL54 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trim43aQ3TL54 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.58■□□□□ 0.56
Trim43aQ3TL54 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.58■□□□□ 0.56
Trim43aQ3TL54 Gm7514-201ENSMUST00000209475 934 ntBASIC18.58■□□□□ 0.56
Trim43aQ3TL54 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trim43aQ3TL54 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trim43aQ3TL54 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trim43aQ3TL54 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trim43aQ3TL54 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim43aQ3TL54 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim43aQ3TL54 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim43aQ3TL54 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim43aQ3TL54 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.57■□□□□ 0.56
Trim43aQ3TL54 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim43aQ3TL54 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trim43aQ3TL54 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
Trim43aQ3TL54 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Trim43aQ3TL54 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim43aQ3TL54 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim43aQ3TL54 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Trim43aQ3TL54 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Trim43aQ3TL54 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim43aQ3TL54 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Trim43aQ3TL54 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim43aQ3TL54 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trim43aQ3TL54 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trim43aQ3TL54 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.56■□□□□ 0.56
Trim43aQ3TL54 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Trim43aQ3TL54 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Trim43aQ3TL54 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
Trim43aQ3TL54 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Trim43aQ3TL54 Mir8112-201ENSMUST00000184382 131 ntBASIC18.56■□□□□ 0.56
Trim43aQ3TL54 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 103.5 ms