Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
NclP09405 Gm45058-201ENSMUST00000205810 766 ntBASIC25.99■■□□□ 1.75
NclP09405 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC25.99■■□□□ 1.75
NclP09405 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
NclP09405 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC25.99■■□□□ 1.75
NclP09405 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC25.99■■□□□ 1.75
NclP09405 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
NclP09405 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
NclP09405 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
NclP09405 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
NclP09405 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC25.99■■□□□ 1.75
NclP09405 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
NclP09405 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
NclP09405 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC25.98■■□□□ 1.75
NclP09405 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
NclP09405 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC25.98■■□□□ 1.75
NclP09405 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
NclP09405 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
NclP09405 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
NclP09405 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
NclP09405 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
NclP09405 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC25.97■■□□□ 1.75
NclP09405 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
NclP09405 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
NclP09405 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC25.97■■□□□ 1.75
NclP09405 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
NclP09405 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC25.97■■□□□ 1.75
NclP09405 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
NclP09405 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC25.97■■□□□ 1.75
NclP09405 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC25.96■■□□□ 1.75
NclP09405 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
NclP09405 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
NclP09405 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC25.96■■□□□ 1.75
NclP09405 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
NclP09405 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
NclP09405 Gm7638-201ENSMUST00000121348 967 ntBASIC25.96■■□□□ 1.75
NclP09405 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
NclP09405 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC25.96■■□□□ 1.75
NclP09405 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
NclP09405 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC25.96■■□□□ 1.75
NclP09405 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
NclP09405 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC25.96■■□□□ 1.75
NclP09405 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
NclP09405 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
NclP09405 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
NclP09405 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
NclP09405 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
NclP09405 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.75
NclP09405 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
NclP09405 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC25.95■■□□□ 1.75
NclP09405 Fst-202ENSMUST00000223640 2612 ntBASIC25.95■■□□□ 1.74
NclP09405 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
NclP09405 AC123834.2-201ENSMUST00000224038 2340 ntBASIC25.95■■□□□ 1.74
NclP09405 Gm35558-201ENSMUST00000222675 2219 ntBASIC25.95■■□□□ 1.74
NclP09405 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
NclP09405 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC25.94■■□□□ 1.74
NclP09405 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
NclP09405 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
NclP09405 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC25.94■■□□□ 1.74
NclP09405 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
NclP09405 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
NclP09405 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC25.94■■□□□ 1.74
NclP09405 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
NclP09405 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
NclP09405 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
NclP09405 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
NclP09405 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
NclP09405 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
NclP09405 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
NclP09405 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC25.93■■□□□ 1.74
NclP09405 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC25.93■■□□□ 1.74
NclP09405 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
NclP09405 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
NclP09405 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC25.93■■□□□ 1.74
NclP09405 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
NclP09405 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC25.93■■□□□ 1.74
NclP09405 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
NclP09405 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
NclP09405 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC25.93■■□□□ 1.74
NclP09405 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
NclP09405 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC25.92■■□□□ 1.74
NclP09405 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC25.92■■□□□ 1.74
NclP09405 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC25.92■■□□□ 1.74
NclP09405 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
NclP09405 Gm6659-201ENSMUST00000174752 547 ntBASIC25.92■■□□□ 1.74
NclP09405 Mir5130-201ENSMUST00000175160 84 ntBASIC25.92■■□□□ 1.74
NclP09405 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC25.92■■□□□ 1.74
NclP09405 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
NclP09405 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC25.92■■□□□ 1.74
NclP09405 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC25.92■■□□□ 1.74
NclP09405 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC25.92■■□□□ 1.74
NclP09405 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC25.92■■□□□ 1.74
NclP09405 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC25.92■■□□□ 1.74
NclP09405 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
NclP09405 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC25.92■■□□□ 1.74
NclP09405 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC25.92■■□□□ 1.74
NclP09405 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
NclP09405 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC25.91■■□□□ 1.74
NclP09405 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC25.91■■□□□ 1.74
NclP09405 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC25.91■■□□□ 1.74
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms