Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC14.22□□□□□ -0.13
Smco4Q9JIS3 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Smco4Q9JIS3 Gm10399-202ENSMUST00000202768 748 ntBASIC14.22□□□□□ -0.13
Smco4Q9JIS3 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smco4Q9JIS3 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smco4Q9JIS3 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
Smco4Q9JIS3 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC14.22□□□□□ -0.13
Smco4Q9JIS3 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smco4Q9JIS3 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Smco4Q9JIS3 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smco4Q9JIS3 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smco4Q9JIS3 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC14.22□□□□□ -0.13
Smco4Q9JIS3 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Smco4Q9JIS3 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smco4Q9JIS3 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Smco4Q9JIS3 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
Smco4Q9JIS3 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Smco4Q9JIS3 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.21□□□□□ -0.13
Smco4Q9JIS3 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Smco4Q9JIS3 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smco4Q9JIS3 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smco4Q9JIS3 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Smco4Q9JIS3 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smco4Q9JIS3 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smco4Q9JIS3 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smco4Q9JIS3 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC14.21□□□□□ -0.13
Smco4Q9JIS3 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smco4Q9JIS3 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smco4Q9JIS3 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Smco4Q9JIS3 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Smco4Q9JIS3 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Smco4Q9JIS3 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smco4Q9JIS3 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Smco4Q9JIS3 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Smco4Q9JIS3 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Smco4Q9JIS3 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Smco4Q9JIS3 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Smco4Q9JIS3 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Smco4Q9JIS3 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Smco4Q9JIS3 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Smco4Q9JIS3 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smco4Q9JIS3 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Smco4Q9JIS3 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smco4Q9JIS3 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smco4Q9JIS3 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smco4Q9JIS3 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Smco4Q9JIS3 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC14.2□□□□□ -0.14
Smco4Q9JIS3 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC14.2□□□□□ -0.14
Smco4Q9JIS3 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smco4Q9JIS3 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smco4Q9JIS3 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smco4Q9JIS3 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC14.2□□□□□ -0.14
Smco4Q9JIS3 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Smco4Q9JIS3 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC14.2□□□□□ -0.14
Smco4Q9JIS3 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC14.2□□□□□ -0.14
Smco4Q9JIS3 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Smco4Q9JIS3 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smco4Q9JIS3 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Smco4Q9JIS3 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smco4Q9JIS3 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smco4Q9JIS3 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smco4Q9JIS3 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smco4Q9JIS3 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
Smco4Q9JIS3 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smco4Q9JIS3 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smco4Q9JIS3 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smco4Q9JIS3 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Smco4Q9JIS3 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Smco4Q9JIS3 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smco4Q9JIS3 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smco4Q9JIS3 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC14.19□□□□□ -0.14
Smco4Q9JIS3 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smco4Q9JIS3 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC14.19□□□□□ -0.14
Smco4Q9JIS3 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smco4Q9JIS3 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smco4Q9JIS3 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smco4Q9JIS3 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Smco4Q9JIS3 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smco4Q9JIS3 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smco4Q9JIS3 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC14.19□□□□□ -0.14
Smco4Q9JIS3 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Smco4Q9JIS3 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smco4Q9JIS3 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smco4Q9JIS3 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC14.19□□□□□ -0.14
Smco4Q9JIS3 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
Smco4Q9JIS3 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Smco4Q9JIS3 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smco4Q9JIS3 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smco4Q9JIS3 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Smco4Q9JIS3 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smco4Q9JIS3 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smco4Q9JIS3 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Smco4Q9JIS3 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.18□□□□□ -0.14
Smco4Q9JIS3 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC14.18□□□□□ -0.14
Smco4Q9JIS3 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smco4Q9JIS3 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smco4Q9JIS3 Gm16464-201ENSMUST00000117815 1095 ntBASIC14.18□□□□□ -0.14
Smco4Q9JIS3 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Smco4Q9JIS3 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Smco4Q9JIS3 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 246 ms