Protein–RNA interactions for Protein: Q61345

Foxd1, Forkhead box protein D1, mousemouse

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd1Q61345 Gm6736-201ENSMUST00000166583 948 ntBASIC20.3■□□□□ 0.84
Foxd1Q61345 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Foxd1Q61345 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Foxd1Q61345 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC20.3■□□□□ 0.84
Foxd1Q61345 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Foxd1Q61345 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC20.3■□□□□ 0.84
Foxd1Q61345 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Foxd1Q61345 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Foxd1Q61345 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Foxd1Q61345 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
Foxd1Q61345 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Foxd1Q61345 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC20.29■□□□□ 0.84
Foxd1Q61345 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Foxd1Q61345 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC20.29■□□□□ 0.84
Foxd1Q61345 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
Foxd1Q61345 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Foxd1Q61345 Gm27525-201ENSMUST00000184465 107 ntBASIC20.29■□□□□ 0.84
Foxd1Q61345 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Foxd1Q61345 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Foxd1Q61345 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC20.29■□□□□ 0.84
Foxd1Q61345 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Foxd1Q61345 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Foxd1Q61345 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Foxd1Q61345 Dmtn-210ENSMUST00000228824 2377 ntBASIC20.29■□□□□ 0.84
Foxd1Q61345 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Foxd1Q61345 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Foxd1Q61345 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Foxd1Q61345 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Foxd1Q61345 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Foxd1Q61345 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Foxd1Q61345 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC20.28■□□□□ 0.84
Foxd1Q61345 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Foxd1Q61345 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Foxd1Q61345 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Foxd1Q61345 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Foxd1Q61345 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Foxd1Q61345 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Foxd1Q61345 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Foxd1Q61345 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Foxd1Q61345 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC20.28■□□□□ 0.84
Foxd1Q61345 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Foxd1Q61345 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Foxd1Q61345 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Foxd1Q61345 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Foxd1Q61345 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Foxd1Q61345 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Foxd1Q61345 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Foxd1Q61345 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.27■□□□□ 0.84
Foxd1Q61345 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC20.27■□□□□ 0.84
Foxd1Q61345 AC121961.1-201ENSMUST00000218594 1779 ntBASIC20.27■□□□□ 0.84
Foxd1Q61345 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC20.27■□□□□ 0.84
Foxd1Q61345 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Foxd1Q61345 Gm43438-201ENSMUST00000198133 379 ntBASIC20.27■□□□□ 0.84
Foxd1Q61345 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC20.27■□□□□ 0.84
Foxd1Q61345 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Foxd1Q61345 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Foxd1Q61345 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Foxd1Q61345 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Foxd1Q61345 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Foxd1Q61345 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Foxd1Q61345 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Foxd1Q61345 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Foxd1Q61345 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Foxd1Q61345 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Foxd1Q61345 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Foxd1Q61345 Gm14057-201ENSMUST00000120631 482 ntBASIC20.26■□□□□ 0.83
Foxd1Q61345 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC20.26■□□□□ 0.83
Foxd1Q61345 Gm8000-201ENSMUST00000188378 592 ntBASIC20.26■□□□□ 0.83
Foxd1Q61345 Gm5264-201ENSMUST00000190584 848 ntBASIC20.26■□□□□ 0.83
Foxd1Q61345 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC20.26■□□□□ 0.83
Foxd1Q61345 Gm17808-201ENSMUST00000200859 894 ntBASIC20.26■□□□□ 0.83
Foxd1Q61345 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Foxd1Q61345 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Foxd1Q61345 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Foxd1Q61345 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Foxd1Q61345 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Foxd1Q61345 Gm43213-201ENSMUST00000151866 1790 ntBASIC20.26■□□□□ 0.83
Foxd1Q61345 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Foxd1Q61345 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Foxd1Q61345 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Foxd1Q61345 Gm15375-201ENSMUST00000119510 849 ntBASIC20.25■□□□□ 0.83
Foxd1Q61345 Gm16061-201ENSMUST00000122167 857 ntBASIC20.25■□□□□ 0.83
Foxd1Q61345 Gm13474-201ENSMUST00000122466 815 ntBASIC20.25■□□□□ 0.83
Foxd1Q61345 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC20.25■□□□□ 0.83
Foxd1Q61345 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Foxd1Q61345 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Foxd1Q61345 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Foxd1Q61345 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Foxd1Q61345 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Foxd1Q61345 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Foxd1Q61345 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Foxd1Q61345 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Foxd1Q61345 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Foxd1Q61345 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Foxd1Q61345 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Foxd1Q61345 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Foxd1Q61345 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Foxd1Q61345 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Foxd1Q61345 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Foxd1Q61345 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 93 ms