Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smco4Q9JIS3 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smco4Q9JIS3 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smco4Q9JIS3 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smco4Q9JIS3 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smco4Q9JIS3 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smco4Q9JIS3 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Smco4Q9JIS3 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Smco4Q9JIS3 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC14.26□□□□□ -0.13
Smco4Q9JIS3 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC14.26□□□□□ -0.13
Smco4Q9JIS3 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Smco4Q9JIS3 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Smco4Q9JIS3 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Smco4Q9JIS3 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smco4Q9JIS3 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC14.26□□□□□ -0.13
Smco4Q9JIS3 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC14.26□□□□□ -0.13
Smco4Q9JIS3 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Smco4Q9JIS3 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Smco4Q9JIS3 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Smco4Q9JIS3 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smco4Q9JIS3 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smco4Q9JIS3 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smco4Q9JIS3 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smco4Q9JIS3 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smco4Q9JIS3 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Smco4Q9JIS3 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smco4Q9JIS3 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smco4Q9JIS3 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smco4Q9JIS3 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smco4Q9JIS3 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Smco4Q9JIS3 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smco4Q9JIS3 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smco4Q9JIS3 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smco4Q9JIS3 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smco4Q9JIS3 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Smco4Q9JIS3 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smco4Q9JIS3 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smco4Q9JIS3 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Smco4Q9JIS3 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smco4Q9JIS3 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smco4Q9JIS3 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
Smco4Q9JIS3 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smco4Q9JIS3 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Smco4Q9JIS3 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smco4Q9JIS3 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Smco4Q9JIS3 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smco4Q9JIS3 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smco4Q9JIS3 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smco4Q9JIS3 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smco4Q9JIS3 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smco4Q9JIS3 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smco4Q9JIS3 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smco4Q9JIS3 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smco4Q9JIS3 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smco4Q9JIS3 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Smco4Q9JIS3 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smco4Q9JIS3 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smco4Q9JIS3 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smco4Q9JIS3 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smco4Q9JIS3 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Smco4Q9JIS3 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Smco4Q9JIS3 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smco4Q9JIS3 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smco4Q9JIS3 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Smco4Q9JIS3 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smco4Q9JIS3 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smco4Q9JIS3 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smco4Q9JIS3 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smco4Q9JIS3 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smco4Q9JIS3 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smco4Q9JIS3 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smco4Q9JIS3 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Smco4Q9JIS3 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC14.24□□□□□ -0.13
Smco4Q9JIS3 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Smco4Q9JIS3 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smco4Q9JIS3 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smco4Q9JIS3 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Smco4Q9JIS3 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.24□□□□□ -0.13
Smco4Q9JIS3 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smco4Q9JIS3 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smco4Q9JIS3 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smco4Q9JIS3 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC14.23□□□□□ -0.13
Smco4Q9JIS3 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Smco4Q9JIS3 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Smco4Q9JIS3 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Smco4Q9JIS3 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Smco4Q9JIS3 Gm16401-202ENSMUST00000197463 2074 ntBASIC14.23□□□□□ -0.13
Smco4Q9JIS3 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smco4Q9JIS3 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Smco4Q9JIS3 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smco4Q9JIS3 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC14.23□□□□□ -0.13
Smco4Q9JIS3 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC14.23□□□□□ -0.13
Smco4Q9JIS3 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Smco4Q9JIS3 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smco4Q9JIS3 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Smco4Q9JIS3 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC14.22□□□□□ -0.13
Smco4Q9JIS3 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smco4Q9JIS3 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smco4Q9JIS3 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smco4Q9JIS3 Gm13216-201ENSMUST00000117145 591 ntBASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms