Protein–RNA interactions for Protein: Q9DA80

Rsph3b, Radial spoke head protein 3 homolog B, mousemouse

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph3bQ9DA80 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rsph3bQ9DA80 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rsph3bQ9DA80 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Rsph3bQ9DA80 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rsph3bQ9DA80 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rsph3bQ9DA80 Golph3-205ENSMUST00000228671 2842 ntBASIC19.32■□□□□ 0.68
Rsph3bQ9DA80 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Rsph3bQ9DA80 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rsph3bQ9DA80 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC19.32■□□□□ 0.68
Rsph3bQ9DA80 Gm10231-201ENSMUST00000181584 441 ntBASIC19.32■□□□□ 0.68
Rsph3bQ9DA80 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rsph3bQ9DA80 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rsph3bQ9DA80 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rsph3bQ9DA80 Gm10175-202ENSMUST00000208752 441 ntBASIC19.32■□□□□ 0.68
Rsph3bQ9DA80 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rsph3bQ9DA80 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rsph3bQ9DA80 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC19.32■□□□□ 0.68
Rsph3bQ9DA80 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rsph3bQ9DA80 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rsph3bQ9DA80 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.32■□□□□ 0.68
Rsph3bQ9DA80 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rsph3bQ9DA80 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rsph3bQ9DA80 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rsph3bQ9DA80 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rsph3bQ9DA80 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rsph3bQ9DA80 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rsph3bQ9DA80 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC19.31■□□□□ 0.68
Rsph3bQ9DA80 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Rsph3bQ9DA80 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC19.31■□□□□ 0.68
Rsph3bQ9DA80 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Rsph3bQ9DA80 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rsph3bQ9DA80 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Rsph3bQ9DA80 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rsph3bQ9DA80 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Rsph3bQ9DA80 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Rsph3bQ9DA80 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Rsph3bQ9DA80 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Rsph3bQ9DA80 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rsph3bQ9DA80 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rsph3bQ9DA80 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rsph3bQ9DA80 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rsph3bQ9DA80 Gm7889-201ENSMUST00000185591 958 ntBASIC19.3■□□□□ 0.68
Rsph3bQ9DA80 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rsph3bQ9DA80 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rsph3bQ9DA80 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rsph3bQ9DA80 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rsph3bQ9DA80 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rsph3bQ9DA80 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Rsph3bQ9DA80 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rsph3bQ9DA80 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rsph3bQ9DA80 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rsph3bQ9DA80 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC19.3■□□□□ 0.68
Rsph3bQ9DA80 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Rsph3bQ9DA80 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rsph3bQ9DA80 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC19.29■□□□□ 0.68
Rsph3bQ9DA80 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Rsph3bQ9DA80 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rsph3bQ9DA80 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Rsph3bQ9DA80 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC19.29■□□□□ 0.68
Rsph3bQ9DA80 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC19.29■□□□□ 0.68
Rsph3bQ9DA80 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Rsph3bQ9DA80 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC19.29■□□□□ 0.68
Rsph3bQ9DA80 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rsph3bQ9DA80 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Rsph3bQ9DA80 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.29■□□□□ 0.68
Rsph3bQ9DA80 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Rsph3bQ9DA80 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Rsph3bQ9DA80 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rsph3bQ9DA80 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rsph3bQ9DA80 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rsph3bQ9DA80 Gm10418-201ENSMUST00000100943 576 ntBASIC19.28■□□□□ 0.68
Rsph3bQ9DA80 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rsph3bQ9DA80 Gm4974-201ENSMUST00000209974 875 ntBASIC19.28■□□□□ 0.68
Rsph3bQ9DA80 AC159205.6-201ENSMUST00000224935 887 ntBASIC19.28■□□□□ 0.68
Rsph3bQ9DA80 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rsph3bQ9DA80 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rsph3bQ9DA80 Gm37820-201ENSMUST00000194021 2147 ntBASIC19.28■□□□□ 0.68
Rsph3bQ9DA80 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Rsph3bQ9DA80 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rsph3bQ9DA80 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Rsph3bQ9DA80 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Rsph3bQ9DA80 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC19.27■□□□□ 0.68
Rsph3bQ9DA80 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rsph3bQ9DA80 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rsph3bQ9DA80 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Rsph3bQ9DA80 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rsph3bQ9DA80 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rsph3bQ9DA80 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
Rsph3bQ9DA80 Gm43213-201ENSMUST00000151866 1790 ntBASIC19.27■□□□□ 0.67
Rsph3bQ9DA80 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Rsph3bQ9DA80 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rsph3bQ9DA80 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rsph3bQ9DA80 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rsph3bQ9DA80 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Rsph3bQ9DA80 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Rsph3bQ9DA80 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rsph3bQ9DA80 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rsph3bQ9DA80 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rsph3bQ9DA80 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rsph3bQ9DA80 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms