Protein–RNA interactions for Protein: Q9R013

Ctsf, Cathepsin F, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtsfQ9R013 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CtsfQ9R013 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CtsfQ9R013 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CtsfQ9R013 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CtsfQ9R013 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CtsfQ9R013 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CtsfQ9R013 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CtsfQ9R013 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CtsfQ9R013 Otx2os1-204ENSMUST00000227221 751 ntBASIC19.2■□□□□ 0.66
CtsfQ9R013 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CtsfQ9R013 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CtsfQ9R013 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CtsfQ9R013 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC19.2■□□□□ 0.66
CtsfQ9R013 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CtsfQ9R013 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CtsfQ9R013 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC19.19■□□□□ 0.66
CtsfQ9R013 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CtsfQ9R013 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
CtsfQ9R013 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC19.19■□□□□ 0.66
CtsfQ9R013 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CtsfQ9R013 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CtsfQ9R013 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
CtsfQ9R013 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CtsfQ9R013 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
CtsfQ9R013 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CtsfQ9R013 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CtsfQ9R013 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
CtsfQ9R013 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CtsfQ9R013 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.19■□□□□ 0.66
CtsfQ9R013 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CtsfQ9R013 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CtsfQ9R013 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CtsfQ9R013 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CtsfQ9R013 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CtsfQ9R013 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CtsfQ9R013 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CtsfQ9R013 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CtsfQ9R013 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CtsfQ9R013 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CtsfQ9R013 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CtsfQ9R013 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC19.18■□□□□ 0.66
CtsfQ9R013 Rarb-207ENSMUST00000225921 2756 ntBASIC19.18■□□□□ 0.66
CtsfQ9R013 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CtsfQ9R013 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CtsfQ9R013 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CtsfQ9R013 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CtsfQ9R013 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CtsfQ9R013 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
CtsfQ9R013 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CtsfQ9R013 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CtsfQ9R013 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CtsfQ9R013 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CtsfQ9R013 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CtsfQ9R013 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CtsfQ9R013 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CtsfQ9R013 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC19.17■□□□□ 0.66
CtsfQ9R013 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CtsfQ9R013 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CtsfQ9R013 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
CtsfQ9R013 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC19.17■□□□□ 0.66
CtsfQ9R013 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC19.17■□□□□ 0.66
CtsfQ9R013 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CtsfQ9R013 Gm42939-201ENSMUST00000197514 2205 ntBASIC19.17■□□□□ 0.66
CtsfQ9R013 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
CtsfQ9R013 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CtsfQ9R013 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC19.17■□□□□ 0.66
CtsfQ9R013 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CtsfQ9R013 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC19.17■□□□□ 0.66
CtsfQ9R013 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CtsfQ9R013 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CtsfQ9R013 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CtsfQ9R013 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CtsfQ9R013 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CtsfQ9R013 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC19.16■□□□□ 0.66
CtsfQ9R013 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CtsfQ9R013 Gm7889-201ENSMUST00000185591 958 ntBASIC19.16■□□□□ 0.66
CtsfQ9R013 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CtsfQ9R013 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CtsfQ9R013 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CtsfQ9R013 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
CtsfQ9R013 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CtsfQ9R013 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CtsfQ9R013 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CtsfQ9R013 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CtsfQ9R013 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CtsfQ9R013 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CtsfQ9R013 Gm9194-201ENSMUST00000220749 1447 ntBASIC19.16■□□□□ 0.66
CtsfQ9R013 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC19.15■□□□□ 0.66
CtsfQ9R013 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
CtsfQ9R013 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CtsfQ9R013 Gm10654-201ENSMUST00000098653 1633 ntBASIC19.15■□□□□ 0.66
CtsfQ9R013 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC19.15■□□□□ 0.66
CtsfQ9R013 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CtsfQ9R013 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CtsfQ9R013 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CtsfQ9R013 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CtsfQ9R013 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.15■□□□□ 0.66
CtsfQ9R013 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CtsfQ9R013 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CtsfQ9R013 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms