Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.79■□□□□ 0.44
Pfdn6Q03958 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pfdn6Q03958 Gm13148-201ENSMUST00000118892 745 ntBASIC17.79■□□□□ 0.44
Pfdn6Q03958 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC17.79■□□□□ 0.44
Pfdn6Q03958 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.79■□□□□ 0.44
Pfdn6Q03958 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Pfdn6Q03958 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Pfdn6Q03958 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pfdn6Q03958 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pfdn6Q03958 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.79■□□□□ 0.44
Pfdn6Q03958 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pfdn6Q03958 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.79■□□□□ 0.44
Pfdn6Q03958 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.78■□□□□ 0.44
Pfdn6Q03958 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pfdn6Q03958 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pfdn6Q03958 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pfdn6Q03958 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.78■□□□□ 0.44
Pfdn6Q03958 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pfdn6Q03958 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Pfdn6Q03958 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pfdn6Q03958 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pfdn6Q03958 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.78■□□□□ 0.44
Pfdn6Q03958 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pfdn6Q03958 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Pfdn6Q03958 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pfdn6Q03958 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.78■□□□□ 0.44
Pfdn6Q03958 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Pfdn6Q03958 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pfdn6Q03958 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pfdn6Q03958 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Pfdn6Q03958 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pfdn6Q03958 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pfdn6Q03958 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pfdn6Q03958 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
Pfdn6Q03958 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pfdn6Q03958 Gm38285-201ENSMUST00000192928 922 ntBASIC17.77■□□□□ 0.44
Pfdn6Q03958 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.77■□□□□ 0.44
Pfdn6Q03958 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC17.77■□□□□ 0.44
Pfdn6Q03958 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pfdn6Q03958 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pfdn6Q03958 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pfdn6Q03958 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pfdn6Q03958 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Pfdn6Q03958 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Pfdn6Q03958 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Pfdn6Q03958 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pfdn6Q03958 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Pfdn6Q03958 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pfdn6Q03958 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.76■□□□□ 0.43
Pfdn6Q03958 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pfdn6Q03958 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pfdn6Q03958 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pfdn6Q03958 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Pfdn6Q03958 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pfdn6Q03958 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pfdn6Q03958 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pfdn6Q03958 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Pfdn6Q03958 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
Pfdn6Q03958 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pfdn6Q03958 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pfdn6Q03958 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pfdn6Q03958 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pfdn6Q03958 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pfdn6Q03958 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pfdn6Q03958 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.76■□□□□ 0.43
Pfdn6Q03958 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.75■□□□□ 0.43
Pfdn6Q03958 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.75■□□□□ 0.43
Pfdn6Q03958 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pfdn6Q03958 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pfdn6Q03958 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pfdn6Q03958 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pfdn6Q03958 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pfdn6Q03958 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.75■□□□□ 0.43
Pfdn6Q03958 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pfdn6Q03958 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pfdn6Q03958 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.75■□□□□ 0.43
Pfdn6Q03958 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Pfdn6Q03958 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pfdn6Q03958 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pfdn6Q03958 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pfdn6Q03958 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pfdn6Q03958 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pfdn6Q03958 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.74■□□□□ 0.43
Pfdn6Q03958 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pfdn6Q03958 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pfdn6Q03958 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pfdn6Q03958 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pfdn6Q03958 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pfdn6Q03958 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pfdn6Q03958 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pfdn6Q03958 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pfdn6Q03958 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pfdn6Q03958 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Pfdn6Q03958 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Pfdn6Q03958 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.74■□□□□ 0.43
Pfdn6Q03958 Zfp783-201ENSMUST00000095946 670 ntBASIC17.74■□□□□ 0.43
Pfdn6Q03958 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pfdn6Q03958 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pfdn6Q03958 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pfdn6Q03958 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms