Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb2Q91Y00 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb2Q91Y00 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb2Q91Y00 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb2Q91Y00 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb2Q91Y00 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb2Q91Y00 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb2Q91Y00 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.87■□□□□ 0.61
Pcdhb2Q91Y00 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.87■□□□□ 0.61
Pcdhb2Q91Y00 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.87■□□□□ 0.61
Pcdhb2Q91Y00 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC18.87■□□□□ 0.61
Pcdhb2Q91Y00 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb2Q91Y00 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb2Q91Y00 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb2Q91Y00 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Pcdhb2Q91Y00 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Pcdhb2Q91Y00 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Pcdhb2Q91Y00 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb2Q91Y00 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb2Q91Y00 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb2Q91Y00 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Pcdhb2Q91Y00 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Pcdhb2Q91Y00 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC18.86■□□□□ 0.61
Pcdhb2Q91Y00 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb2Q91Y00 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb2Q91Y00 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb2Q91Y00 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb2Q91Y00 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb2Q91Y00 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb2Q91Y00 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb2Q91Y00 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb2Q91Y00 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb2Q91Y00 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC18.85■□□□□ 0.61
Pcdhb2Q91Y00 Gm18025-201ENSMUST00000221733 862 ntBASIC18.85■□□□□ 0.61
Pcdhb2Q91Y00 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb2Q91Y00 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb2Q91Y00 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb2Q91Y00 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb2Q91Y00 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb2Q91Y00 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Pcdhb2Q91Y00 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb2Q91Y00 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb2Q91Y00 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb2Q91Y00 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb2Q91Y00 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.84■□□□□ 0.61
Pcdhb2Q91Y00 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.84■□□□□ 0.61
Pcdhb2Q91Y00 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Pcdhb2Q91Y00 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb2Q91Y00 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb2Q91Y00 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb2Q91Y00 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC18.84■□□□□ 0.61
Pcdhb2Q91Y00 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.84■□□□□ 0.61
Pcdhb2Q91Y00 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb2Q91Y00 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb2Q91Y00 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC18.84■□□□□ 0.61
Pcdhb2Q91Y00 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.84■□□□□ 0.61
Pcdhb2Q91Y00 Gm42545-201ENSMUST00000202755 922 ntBASIC18.84■□□□□ 0.61
Pcdhb2Q91Y00 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Pcdhb2Q91Y00 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb2Q91Y00 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb2Q91Y00 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb2Q91Y00 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC18.84■□□□□ 0.61
Pcdhb2Q91Y00 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdhb2Q91Y00 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.83■□□□□ 0.61
Pcdhb2Q91Y00 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdhb2Q91Y00 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Pcdhb2Q91Y00 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhb2Q91Y00 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhb2Q91Y00 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC18.83■□□□□ 0.6
Pcdhb2Q91Y00 Gm6576-201ENSMUST00000169678 883 ntBASIC18.83■□□□□ 0.6
Pcdhb2Q91Y00 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC18.83■□□□□ 0.6
Pcdhb2Q91Y00 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhb2Q91Y00 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhb2Q91Y00 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhb2Q91Y00 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Pcdhb2Q91Y00 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.83■□□□□ 0.6
Pcdhb2Q91Y00 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhb2Q91Y00 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhb2Q91Y00 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Pcdhb2Q91Y00 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.82■□□□□ 0.6
Pcdhb2Q91Y00 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb2Q91Y00 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb2Q91Y00 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
Pcdhb2Q91Y00 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb2Q91Y00 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Pcdhb2Q91Y00 Gm13181-201ENSMUST00000120117 1069 ntBASIC18.82■□□□□ 0.6
Pcdhb2Q91Y00 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.82■□□□□ 0.6
Pcdhb2Q91Y00 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Pcdhb2Q91Y00 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb2Q91Y00 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb2Q91Y00 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb2Q91Y00 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Pcdhb2Q91Y00 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb2Q91Y00 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb2Q91Y00 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Pcdhb2Q91Y00 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Pcdhb2Q91Y00 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb2Q91Y00 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
Pcdhb2Q91Y00 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb2Q91Y00 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 144 ms