Protein–RNA interactions for Protein: Q8CDN1

Uncharacterized protein C3orf20 homolog, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8CDN1 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Q8CDN1 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Q8CDN1 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.31■□□□□ 0.52
Q8CDN1 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Q8CDN1 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Q8CDN1 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Q8CDN1 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Q8CDN1 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Q8CDN1 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Q8CDN1 Gm6433-201ENSMUST00000118634 875 ntBASIC18.3■□□□□ 0.52
Q8CDN1 Gm13559-201ENSMUST00000120476 863 ntBASIC18.3■□□□□ 0.52
Q8CDN1 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Q8CDN1 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Q8CDN1 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Q8CDN1 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Q8CDN1 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Q8CDN1 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Q8CDN1 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Q8CDN1 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Q8CDN1 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Q8CDN1 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Q8CDN1 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Q8CDN1 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
Q8CDN1 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Q8CDN1 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Q8CDN1 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Q8CDN1 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Q8CDN1 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Q8CDN1 Gm13401-201ENSMUST00000117074 291 ntBASIC18.29■□□□□ 0.52
Q8CDN1 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.29■□□□□ 0.52
Q8CDN1 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC18.29■□□□□ 0.52
Q8CDN1 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.29■□□□□ 0.52
Q8CDN1 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC18.29■□□□□ 0.52
Q8CDN1 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Q8CDN1 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Q8CDN1 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Q8CDN1 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Q8CDN1 Gm8668-201ENSMUST00000120559 1447 ntBASIC18.29■□□□□ 0.52
Q8CDN1 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Q8CDN1 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Q8CDN1 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Q8CDN1 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Q8CDN1 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Q8CDN1 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.29■□□□□ 0.52
Q8CDN1 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Q8CDN1 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Q8CDN1 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Q8CDN1 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Q8CDN1 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Q8CDN1 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC18.28■□□□□ 0.52
Q8CDN1 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Q8CDN1 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Q8CDN1 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Q8CDN1 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Q8CDN1 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Q8CDN1 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Q8CDN1 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.27■□□□□ 0.52
Q8CDN1 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Q8CDN1 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC18.27■□□□□ 0.52
Q8CDN1 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Q8CDN1 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.27■□□□□ 0.52
Q8CDN1 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Q8CDN1 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Q8CDN1 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
Q8CDN1 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Q8CDN1 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.26■□□□□ 0.51
Q8CDN1 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Q8CDN1 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Q8CDN1 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Q8CDN1 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Q8CDN1 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Q8CDN1 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.26■□□□□ 0.51
Q8CDN1 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Q8CDN1 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Q8CDN1 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Q8CDN1 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Q8CDN1 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Q8CDN1 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Q8CDN1 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Q8CDN1 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Q8CDN1 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Q8CDN1 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.26■□□□□ 0.51
Q8CDN1 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Q8CDN1 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Q8CDN1 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
Q8CDN1 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Q8CDN1 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Q8CDN1 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
Q8CDN1 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Q8CDN1 Gm10231-201ENSMUST00000181584 441 ntBASIC18.25■□□□□ 0.51
Q8CDN1 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Q8CDN1 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Q8CDN1 Gm10175-202ENSMUST00000208752 441 ntBASIC18.25■□□□□ 0.51
Q8CDN1 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.25■□□□□ 0.51
Q8CDN1 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Q8CDN1 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.25■□□□□ 0.51
Q8CDN1 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Q8CDN1 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Q8CDN1 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Q8CDN1 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 99.3 ms