Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Tnfrsf1aP25118 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Tnfrsf1aP25118 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC14.9□□□□□ -0.02
Tnfrsf1aP25118 AC164629.5-201ENSMUST00000220387 632 ntBASIC14.9□□□□□ -0.02
Tnfrsf1aP25118 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tnfrsf1aP25118 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC14.9□□□□□ -0.02
Tnfrsf1aP25118 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC14.9□□□□□ -0.02
Tnfrsf1aP25118 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tnfrsf1aP25118 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC14.9□□□□□ -0.02
Tnfrsf1aP25118 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tnfrsf1aP25118 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tnfrsf1aP25118 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Tnfrsf1aP25118 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Tnfrsf1aP25118 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tnfrsf1aP25118 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Tnfrsf1aP25118 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC14.89□□□□□ -0.03
Tnfrsf1aP25118 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Tnfrsf1aP25118 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tnfrsf1aP25118 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tnfrsf1aP25118 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Tnfrsf1aP25118 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC14.89□□□□□ -0.03
Tnfrsf1aP25118 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Tnfrsf1aP25118 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tnfrsf1aP25118 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC14.89□□□□□ -0.03
Tnfrsf1aP25118 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Tnfrsf1aP25118 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tnfrsf1aP25118 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Tnfrsf1aP25118 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Tnfrsf1aP25118 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tnfrsf1aP25118 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tnfrsf1aP25118 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Tnfrsf1aP25118 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC14.89□□□□□ -0.03
Tnfrsf1aP25118 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tnfrsf1aP25118 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tnfrsf1aP25118 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tnfrsf1aP25118 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tnfrsf1aP25118 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tnfrsf1aP25118 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Tnfrsf1aP25118 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Tnfrsf1aP25118 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Tnfrsf1aP25118 Gm42555-201ENSMUST00000199304 1039 ntBASIC14.88□□□□□ -0.03
Tnfrsf1aP25118 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC14.88□□□□□ -0.03
Tnfrsf1aP25118 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tnfrsf1aP25118 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Tnfrsf1aP25118 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Tnfrsf1aP25118 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Tnfrsf1aP25118 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tnfrsf1aP25118 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tnfrsf1aP25118 Gm44832-201ENSMUST00000208849 2303 ntBASIC14.88□□□□□ -0.03
Tnfrsf1aP25118 Gm45606-201ENSMUST00000209836 2795 ntBASIC14.88□□□□□ -0.03
Tnfrsf1aP25118 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tnfrsf1aP25118 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tnfrsf1aP25118 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tnfrsf1aP25118 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Tnfrsf1aP25118 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tnfrsf1aP25118 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tnfrsf1aP25118 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tnfrsf1aP25118 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tnfrsf1aP25118 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Tnfrsf1aP25118 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tnfrsf1aP25118 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
Tnfrsf1aP25118 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Tnfrsf1aP25118 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Tnfrsf1aP25118 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tnfrsf1aP25118 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tnfrsf1aP25118 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tnfrsf1aP25118 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Tnfrsf1aP25118 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tnfrsf1aP25118 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tnfrsf1aP25118 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
Tnfrsf1aP25118 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Tnfrsf1aP25118 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC14.86□□□□□ -0.03
Tnfrsf1aP25118 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Tnfrsf1aP25118 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Tnfrsf1aP25118 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tnfrsf1aP25118 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tnfrsf1aP25118 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tnfrsf1aP25118 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Tnfrsf1aP25118 Gm6211-202ENSMUST00000167849 925 ntBASIC14.86□□□□□ -0.03
Tnfrsf1aP25118 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC14.86□□□□□ -0.03
Tnfrsf1aP25118 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tnfrsf1aP25118 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Tnfrsf1aP25118 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Tnfrsf1aP25118 Gm37374-201ENSMUST00000194954 1829 ntBASIC14.86□□□□□ -0.03
Tnfrsf1aP25118 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tnfrsf1aP25118 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tnfrsf1aP25118 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tnfrsf1aP25118 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tnfrsf1aP25118 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Tnfrsf1aP25118 Gm37563-201ENSMUST00000192580 1513 ntBASIC14.86□□□□□ -0.03
Tnfrsf1aP25118 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Tnfrsf1aP25118 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Tnfrsf1aP25118 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Tnfrsf1aP25118 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tnfrsf1aP25118 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tnfrsf1aP25118 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tnfrsf1aP25118 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tnfrsf1aP25118 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tnfrsf1aP25118 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tnfrsf1aP25118 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 254.7 ms