Protein–RNA interactions for Protein: O88343

Slc4a4, Electrogenic sodium bicarbonate cotransporter 1, mousemouse

Predictions only

Length 1,079 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc4a4O88343 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Slc4a4O88343 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
Slc4a4O88343 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Slc4a4O88343 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Slc4a4O88343 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Slc4a4O88343 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Slc4a4O88343 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC20.97■□□□□ 0.95
Slc4a4O88343 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Slc4a4O88343 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Slc4a4O88343 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC20.96■□□□□ 0.95
Slc4a4O88343 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Slc4a4O88343 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Slc4a4O88343 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Slc4a4O88343 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Slc4a4O88343 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Slc4a4O88343 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Slc4a4O88343 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Slc4a4O88343 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Slc4a4O88343 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC20.96■□□□□ 0.95
Slc4a4O88343 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Slc4a4O88343 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
Slc4a4O88343 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC20.95■□□□□ 0.94
Slc4a4O88343 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Slc4a4O88343 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Slc4a4O88343 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Slc4a4O88343 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC20.95■□□□□ 0.94
Slc4a4O88343 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Slc4a4O88343 Gm29791-202ENSMUST00000207888 369 ntBASIC20.95■□□□□ 0.94
Slc4a4O88343 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Slc4a4O88343 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Slc4a4O88343 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Slc4a4O88343 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Slc4a4O88343 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Slc4a4O88343 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Slc4a4O88343 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Slc4a4O88343 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Slc4a4O88343 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Slc4a4O88343 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Slc4a4O88343 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Slc4a4O88343 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Slc4a4O88343 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Slc4a4O88343 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Slc4a4O88343 Gm10418-201ENSMUST00000100943 576 ntBASIC20.94■□□□□ 0.94
Slc4a4O88343 Gm13401-201ENSMUST00000117074 291 ntBASIC20.94■□□□□ 0.94
Slc4a4O88343 Gm10517-202ENSMUST00000192970 758 ntBASIC20.94■□□□□ 0.94
Slc4a4O88343 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Slc4a4O88343 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Slc4a4O88343 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Slc4a4O88343 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Slc4a4O88343 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Slc4a4O88343 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Slc4a4O88343 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Slc4a4O88343 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Slc4a4O88343 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Slc4a4O88343 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Slc4a4O88343 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Slc4a4O88343 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC20.93■□□□□ 0.94
Slc4a4O88343 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Slc4a4O88343 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Slc4a4O88343 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC20.93■□□□□ 0.94
Slc4a4O88343 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Slc4a4O88343 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Slc4a4O88343 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Slc4a4O88343 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Slc4a4O88343 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Slc4a4O88343 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Slc4a4O88343 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Slc4a4O88343 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Slc4a4O88343 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC20.92■□□□□ 0.94
Slc4a4O88343 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Slc4a4O88343 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Slc4a4O88343 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Slc4a4O88343 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Slc4a4O88343 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Slc4a4O88343 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Slc4a4O88343 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Slc4a4O88343 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Slc4a4O88343 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Slc4a4O88343 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Slc4a4O88343 Arhgef4-208ENSMUST00000211073 171 ntBASIC20.91■□□□□ 0.94
Slc4a4O88343 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Slc4a4O88343 AC156016.1-201ENSMUST00000227190 1035 ntBASIC20.91■□□□□ 0.94
Slc4a4O88343 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Slc4a4O88343 Gm5417-201ENSMUST00000079706 384 ntBASIC20.91■□□□□ 0.94
Slc4a4O88343 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Slc4a4O88343 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Slc4a4O88343 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Slc4a4O88343 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Slc4a4O88343 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Slc4a4O88343 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Slc4a4O88343 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Slc4a4O88343 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Slc4a4O88343 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Slc4a4O88343 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Slc4a4O88343 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Slc4a4O88343 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC20.9■□□□□ 0.94
Slc4a4O88343 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Slc4a4O88343 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Slc4a4O88343 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Slc4a4O88343 Gm45141-201ENSMUST00000206502 1888 ntBASIC20.9■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 76.4 ms