Protein–RNA interactions for Protein: A0A140LIP3

4933424G06Rik, RIKEN cDNA 4933424G06 gene, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
4933424G06RikA0A140LIP3 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
4933424G06RikA0A140LIP3 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
4933424G06RikA0A140LIP3 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
4933424G06RikA0A140LIP3 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
4933424G06RikA0A140LIP3 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
4933424G06RikA0A140LIP3 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
4933424G06RikA0A140LIP3 Gm29994-201ENSMUST00000195495 1193 ntBASIC18.16■□□□□ 0.5
4933424G06RikA0A140LIP3 Gm30025-201ENSMUST00000218555 728 ntBASIC18.16■□□□□ 0.5
4933424G06RikA0A140LIP3 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
4933424G06RikA0A140LIP3 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
4933424G06RikA0A140LIP3 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
4933424G06RikA0A140LIP3 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.16■□□□□ 0.5
4933424G06RikA0A140LIP3 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
4933424G06RikA0A140LIP3 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
4933424G06RikA0A140LIP3 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
4933424G06RikA0A140LIP3 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
4933424G06RikA0A140LIP3 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
4933424G06RikA0A140LIP3 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
4933424G06RikA0A140LIP3 Gm7977-201ENSMUST00000193787 748 ntBASIC18.15■□□□□ 0.5
4933424G06RikA0A140LIP3 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC18.15■□□□□ 0.5
4933424G06RikA0A140LIP3 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
4933424G06RikA0A140LIP3 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
4933424G06RikA0A140LIP3 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
4933424G06RikA0A140LIP3 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
4933424G06RikA0A140LIP3 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
4933424G06RikA0A140LIP3 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.5
4933424G06RikA0A140LIP3 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
4933424G06RikA0A140LIP3 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.14■□□□□ 0.5
4933424G06RikA0A140LIP3 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
4933424G06RikA0A140LIP3 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
4933424G06RikA0A140LIP3 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
4933424G06RikA0A140LIP3 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.14■□□□□ 0.49
4933424G06RikA0A140LIP3 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
4933424G06RikA0A140LIP3 Gm43799-201ENSMUST00000201845 579 ntBASIC18.14■□□□□ 0.49
4933424G06RikA0A140LIP3 Odf3b-204ENSMUST00000227834 930 ntBASIC18.14■□□□□ 0.49
4933424G06RikA0A140LIP3 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
4933424G06RikA0A140LIP3 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
4933424G06RikA0A140LIP3 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
4933424G06RikA0A140LIP3 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
4933424G06RikA0A140LIP3 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
4933424G06RikA0A140LIP3 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
4933424G06RikA0A140LIP3 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
4933424G06RikA0A140LIP3 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
4933424G06RikA0A140LIP3 Gm11643-201ENSMUST00000119578 864 ntBASIC18.13■□□□□ 0.49
4933424G06RikA0A140LIP3 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
4933424G06RikA0A140LIP3 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC18.13■□□□□ 0.49
4933424G06RikA0A140LIP3 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
4933424G06RikA0A140LIP3 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
4933424G06RikA0A140LIP3 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
4933424G06RikA0A140LIP3 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
4933424G06RikA0A140LIP3 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
4933424G06RikA0A140LIP3 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
4933424G06RikA0A140LIP3 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
4933424G06RikA0A140LIP3 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
4933424G06RikA0A140LIP3 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
4933424G06RikA0A140LIP3 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
4933424G06RikA0A140LIP3 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
4933424G06RikA0A140LIP3 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
4933424G06RikA0A140LIP3 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC18.12■□□□□ 0.49
4933424G06RikA0A140LIP3 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
4933424G06RikA0A140LIP3 Otx2os1-204ENSMUST00000227221 751 ntBASIC18.12■□□□□ 0.49
4933424G06RikA0A140LIP3 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
4933424G06RikA0A140LIP3 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
4933424G06RikA0A140LIP3 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
4933424G06RikA0A140LIP3 Gm9987-201ENSMUST00000069768 567 ntBASIC18.12■□□□□ 0.49
4933424G06RikA0A140LIP3 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
4933424G06RikA0A140LIP3 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
4933424G06RikA0A140LIP3 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
4933424G06RikA0A140LIP3 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
4933424G06RikA0A140LIP3 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC18.11■□□□□ 0.49
4933424G06RikA0A140LIP3 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
4933424G06RikA0A140LIP3 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
4933424G06RikA0A140LIP3 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.11■□□□□ 0.49
4933424G06RikA0A140LIP3 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
4933424G06RikA0A140LIP3 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
4933424G06RikA0A140LIP3 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
4933424G06RikA0A140LIP3 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
4933424G06RikA0A140LIP3 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
4933424G06RikA0A140LIP3 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
4933424G06RikA0A140LIP3 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
4933424G06RikA0A140LIP3 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
4933424G06RikA0A140LIP3 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
4933424G06RikA0A140LIP3 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
4933424G06RikA0A140LIP3 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
4933424G06RikA0A140LIP3 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.1■□□□□ 0.49
4933424G06RikA0A140LIP3 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
4933424G06RikA0A140LIP3 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
4933424G06RikA0A140LIP3 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
4933424G06RikA0A140LIP3 Gm6433-201ENSMUST00000118634 875 ntBASIC18.1■□□□□ 0.49
4933424G06RikA0A140LIP3 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
4933424G06RikA0A140LIP3 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
4933424G06RikA0A140LIP3 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
4933424G06RikA0A140LIP3 Gm3375-201ENSMUST00000203929 796 ntBASIC18.1■□□□□ 0.49
4933424G06RikA0A140LIP3 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
4933424G06RikA0A140LIP3 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
4933424G06RikA0A140LIP3 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
4933424G06RikA0A140LIP3 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
4933424G06RikA0A140LIP3 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.09■□□□□ 0.49
4933424G06RikA0A140LIP3 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
4933424G06RikA0A140LIP3 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms