Protein–RNA interactions for Protein: Q9QZM0

Ubqln2, Ubiquilin-2, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln2Q9QZM0 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ubqln2Q9QZM0 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Ubqln2Q9QZM0 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ubqln2Q9QZM0 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Ubqln2Q9QZM0 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Ubqln2Q9QZM0 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.88■■□□□ 1.09
Ubqln2Q9QZM0 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Ubqln2Q9QZM0 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ubqln2Q9QZM0 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ubqln2Q9QZM0 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Ubqln2Q9QZM0 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC21.88■■□□□ 1.09
Ubqln2Q9QZM0 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ubqln2Q9QZM0 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC21.87■■□□□ 1.09
Ubqln2Q9QZM0 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Ubqln2Q9QZM0 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ubqln2Q9QZM0 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
Ubqln2Q9QZM0 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Ubqln2Q9QZM0 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ubqln2Q9QZM0 Gm17082-201ENSMUST00000166043 1091 ntBASIC21.86■■□□□ 1.09
Ubqln2Q9QZM0 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21.86■■□□□ 1.09
Ubqln2Q9QZM0 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Ubqln2Q9QZM0 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ubqln2Q9QZM0 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.84■■□□□ 1.09
Ubqln2Q9QZM0 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Ubqln2Q9QZM0 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Ubqln2Q9QZM0 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC21.84■■□□□ 1.09
Ubqln2Q9QZM0 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ubqln2Q9QZM0 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ubqln2Q9QZM0 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.83■■□□□ 1.09
Ubqln2Q9QZM0 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Ubqln2Q9QZM0 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Ubqln2Q9QZM0 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC21.82■■□□□ 1.08
Ubqln2Q9QZM0 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Ubqln2Q9QZM0 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ubqln2Q9QZM0 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ubqln2Q9QZM0 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ubqln2Q9QZM0 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ubqln2Q9QZM0 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ubqln2Q9QZM0 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ubqln2Q9QZM0 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.76■■□□□ 1.07
Ubqln2Q9QZM0 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ubqln2Q9QZM0 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Ubqln2Q9QZM0 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ubqln2Q9QZM0 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Ubqln2Q9QZM0 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Ubqln2Q9QZM0 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC21.74■■□□□ 1.07
Ubqln2Q9QZM0 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ubqln2Q9QZM0 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ubqln2Q9QZM0 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC21.73■■□□□ 1.07
Ubqln2Q9QZM0 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Ubqln2Q9QZM0 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ubqln2Q9QZM0 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ubqln2Q9QZM0 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ubqln2Q9QZM0 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Ubqln2Q9QZM0 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ubqln2Q9QZM0 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Ubqln2Q9QZM0 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ubqln2Q9QZM0 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Ubqln2Q9QZM0 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Ubqln2Q9QZM0 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC21.69■■□□□ 1.06
Ubqln2Q9QZM0 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC21.69■■□□□ 1.06
Ubqln2Q9QZM0 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Ubqln2Q9QZM0 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ubqln2Q9QZM0 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.67■■□□□ 1.06
Ubqln2Q9QZM0 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Ubqln2Q9QZM0 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.67■■□□□ 1.06
Ubqln2Q9QZM0 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ubqln2Q9QZM0 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.65■■□□□ 1.06
Ubqln2Q9QZM0 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ubqln2Q9QZM0 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ubqln2Q9QZM0 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC21.64■■□□□ 1.06
Ubqln2Q9QZM0 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Ubqln2Q9QZM0 Peli2-204ENSMUST00000226513 1320 ntBASIC21.64■■□□□ 1.05
Ubqln2Q9QZM0 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ubqln2Q9QZM0 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ubqln2Q9QZM0 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Ubqln2Q9QZM0 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ubqln2Q9QZM0 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ubqln2Q9QZM0 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ubqln2Q9QZM0 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.61■■□□□ 1.05
Ubqln2Q9QZM0 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ubqln2Q9QZM0 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Ubqln2Q9QZM0 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Ubqln2Q9QZM0 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ubqln2Q9QZM0 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Ubqln2Q9QZM0 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ubqln2Q9QZM0 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ubqln2Q9QZM0 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Ubqln2Q9QZM0 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ubqln2Q9QZM0 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.59■■□□□ 1.05
Ubqln2Q9QZM0 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
Ubqln2Q9QZM0 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ubqln2Q9QZM0 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Ubqln2Q9QZM0 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ubqln2Q9QZM0 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ubqln2Q9QZM0 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Ubqln2Q9QZM0 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ubqln2Q9QZM0 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ubqln2Q9QZM0 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Ubqln2Q9QZM0 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms