Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC27.71■■■□□ 2.03
Lysmd1Q9D0E3 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
Lysmd1Q9D0E3 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC27.69■■■□□ 2.02
Lysmd1Q9D0E3 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC27.69■■■□□ 2.02
Lysmd1Q9D0E3 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC27.69■■■□□ 2.02
Lysmd1Q9D0E3 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC27.68■■■□□ 2.02
Lysmd1Q9D0E3 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC27.68■■■□□ 2.02
Lysmd1Q9D0E3 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
Lysmd1Q9D0E3 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
Lysmd1Q9D0E3 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC27.63■■■□□ 2.01
Lysmd1Q9D0E3 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
Lysmd1Q9D0E3 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
Lysmd1Q9D0E3 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC27.61■■■□□ 2.01
Lysmd1Q9D0E3 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
Lysmd1Q9D0E3 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Lysmd1Q9D0E3 Scarna2-201ENSMUST00000157560 414 ntBASIC27.59■■■□□ 2.01
Lysmd1Q9D0E3 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Lysmd1Q9D0E3 Gm7332-201ENSMUST00000118351 454 ntBASIC27.58■■■□□ 2.01
Lysmd1Q9D0E3 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC27.57■■■□□ 2
Lysmd1Q9D0E3 Gm11687-201ENSMUST00000118911 886 ntBASIC27.57■■■□□ 2
Lysmd1Q9D0E3 Gm5812-201ENSMUST00000061073 957 ntBASIC27.57■■■□□ 2
Lysmd1Q9D0E3 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
Lysmd1Q9D0E3 Gm4799-201ENSMUST00000095396 657 ntBASIC27.54■■■□□ 2
Lysmd1Q9D0E3 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC27.53■■■□□ 2
Lysmd1Q9D0E3 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC27.53■■■□□ 2
Lysmd1Q9D0E3 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Lysmd1Q9D0E3 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Lysmd1Q9D0E3 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC27.52■■■□□ 2
Lysmd1Q9D0E3 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC27.51■■□□□ 1.99
Lysmd1Q9D0E3 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC27.5■■□□□ 1.99
Lysmd1Q9D0E3 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Lysmd1Q9D0E3 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC27.49■■□□□ 1.99
Lysmd1Q9D0E3 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Lysmd1Q9D0E3 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC27.48■■□□□ 1.99
Lysmd1Q9D0E3 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC27.48■■□□□ 1.99
Lysmd1Q9D0E3 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Lysmd1Q9D0E3 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Lysmd1Q9D0E3 Gm9806-201ENSMUST00000051080 552 ntBASIC27.47■■□□□ 1.99
Lysmd1Q9D0E3 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC27.47■■□□□ 1.99
Lysmd1Q9D0E3 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC27.46■■□□□ 1.99
Lysmd1Q9D0E3 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
Lysmd1Q9D0E3 Gm6345-201ENSMUST00000180378 1691 ntBASIC27.46■■□□□ 1.99
Lysmd1Q9D0E3 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC27.45■■□□□ 1.99
Lysmd1Q9D0E3 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
Lysmd1Q9D0E3 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Lysmd1Q9D0E3 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC27.44■■□□□ 1.98
Lysmd1Q9D0E3 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC27.44■■□□□ 1.98
Lysmd1Q9D0E3 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC27.44■■□□□ 1.98
Lysmd1Q9D0E3 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC27.43■■□□□ 1.98
Lysmd1Q9D0E3 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Lysmd1Q9D0E3 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC27.41■■□□□ 1.98
Lysmd1Q9D0E3 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC27.4■■□□□ 1.98
Lysmd1Q9D0E3 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
Lysmd1Q9D0E3 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
Lysmd1Q9D0E3 Gm16437-201ENSMUST00000025669 507 ntBASIC27.39■■□□□ 1.98
Lysmd1Q9D0E3 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC27.38■■□□□ 1.97
Lysmd1Q9D0E3 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC27.38■■□□□ 1.97
Lysmd1Q9D0E3 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
Lysmd1Q9D0E3 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Lysmd1Q9D0E3 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
Lysmd1Q9D0E3 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
Lysmd1Q9D0E3 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC27.36■■□□□ 1.97
Lysmd1Q9D0E3 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Lysmd1Q9D0E3 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC27.35■■□□□ 1.97
Lysmd1Q9D0E3 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC27.35■■□□□ 1.97
Lysmd1Q9D0E3 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Lysmd1Q9D0E3 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC27.34■■□□□ 1.97
Lysmd1Q9D0E3 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Lysmd1Q9D0E3 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Lysmd1Q9D0E3 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
Lysmd1Q9D0E3 Gm27502-201ENSMUST00000183495 199 ntBASIC27.33■■□□□ 1.97
Lysmd1Q9D0E3 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC27.32■■□□□ 1.96
Lysmd1Q9D0E3 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Lysmd1Q9D0E3 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
Lysmd1Q9D0E3 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC27.28■■□□□ 1.96
Lysmd1Q9D0E3 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
Lysmd1Q9D0E3 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Lysmd1Q9D0E3 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC27.26■■□□□ 1.95
Lysmd1Q9D0E3 Gm15546-201ENSMUST00000122095 826 ntBASIC27.26■■□□□ 1.95
Lysmd1Q9D0E3 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC27.26■■□□□ 1.95
Lysmd1Q9D0E3 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Lysmd1Q9D0E3 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC27.25■■□□□ 1.95
Lysmd1Q9D0E3 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Lysmd1Q9D0E3 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Lysmd1Q9D0E3 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Lysmd1Q9D0E3 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Lysmd1Q9D0E3 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC27.2■■□□□ 1.94
Lysmd1Q9D0E3 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC27.2■■□□□ 1.94
Lysmd1Q9D0E3 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Lysmd1Q9D0E3 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Lysmd1Q9D0E3 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC27.19■■□□□ 1.94
Lysmd1Q9D0E3 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
Lysmd1Q9D0E3 Gm5297-201ENSMUST00000198555 1171 ntBASIC27.16■■□□□ 1.94
Lysmd1Q9D0E3 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC27.15■■□□□ 1.94
Lysmd1Q9D0E3 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC27.14■■□□□ 1.94
Lysmd1Q9D0E3 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC27.14■■□□□ 1.94
Lysmd1Q9D0E3 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Lysmd1Q9D0E3 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
Lysmd1Q9D0E3 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC27.11■■□□□ 1.93
Lysmd1Q9D0E3 Gm5067-201ENSMUST00000170449 1009 ntBASIC27.11■■□□□ 1.93
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms