Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Chd1lQ9CXF7 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Chd1lQ9CXF7 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC27.48■■□□□ 1.99
Chd1lQ9CXF7 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC27.46■■□□□ 1.99
Chd1lQ9CXF7 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC27.46■■□□□ 1.99
Chd1lQ9CXF7 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC27.45■■□□□ 1.99
Chd1lQ9CXF7 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
Chd1lQ9CXF7 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC27.45■■□□□ 1.98
Chd1lQ9CXF7 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC27.45■■□□□ 1.98
Chd1lQ9CXF7 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC27.42■■□□□ 1.98
Chd1lQ9CXF7 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Chd1lQ9CXF7 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Chd1lQ9CXF7 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Chd1lQ9CXF7 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC27.4■■□□□ 1.98
Chd1lQ9CXF7 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Chd1lQ9CXF7 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Chd1lQ9CXF7 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC27.39■■□□□ 1.98
Chd1lQ9CXF7 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
Chd1lQ9CXF7 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Chd1lQ9CXF7 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Chd1lQ9CXF7 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Chd1lQ9CXF7 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC27.34■■□□□ 1.97
Chd1lQ9CXF7 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Chd1lQ9CXF7 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC27.33■■□□□ 1.97
Chd1lQ9CXF7 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Chd1lQ9CXF7 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC27.33■■□□□ 1.97
Chd1lQ9CXF7 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC27.33■■□□□ 1.97
Chd1lQ9CXF7 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC27.33■■□□□ 1.96
Chd1lQ9CXF7 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
Chd1lQ9CXF7 Peli2-204ENSMUST00000226513 1320 ntBASIC27.32■■□□□ 1.96
Chd1lQ9CXF7 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Chd1lQ9CXF7 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Chd1lQ9CXF7 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC27.31■■□□□ 1.96
Chd1lQ9CXF7 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Chd1lQ9CXF7 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Chd1lQ9CXF7 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
Chd1lQ9CXF7 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC27.29■■□□□ 1.96
Chd1lQ9CXF7 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Chd1lQ9CXF7 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Chd1lQ9CXF7 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
Chd1lQ9CXF7 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Chd1lQ9CXF7 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
Chd1lQ9CXF7 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.96
Chd1lQ9CXF7 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC27.26■■□□□ 1.96
Chd1lQ9CXF7 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.96
Chd1lQ9CXF7 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC27.26■■□□□ 1.96
Chd1lQ9CXF7 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Chd1lQ9CXF7 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Chd1lQ9CXF7 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC27.25■■□□□ 1.95
Chd1lQ9CXF7 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Chd1lQ9CXF7 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Chd1lQ9CXF7 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC27.24■■□□□ 1.95
Chd1lQ9CXF7 Pcf11-205ENSMUST00000208255 1720 ntBASIC27.24■■□□□ 1.95
Chd1lQ9CXF7 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC27.24■■□□□ 1.95
Chd1lQ9CXF7 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Chd1lQ9CXF7 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC27.22■■□□□ 1.95
Chd1lQ9CXF7 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Chd1lQ9CXF7 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Chd1lQ9CXF7 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
Chd1lQ9CXF7 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
Chd1lQ9CXF7 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
Chd1lQ9CXF7 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC27.21■■□□□ 1.95
Chd1lQ9CXF7 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC27.21■■□□□ 1.95
Chd1lQ9CXF7 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
Chd1lQ9CXF7 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Chd1lQ9CXF7 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Chd1lQ9CXF7 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Chd1lQ9CXF7 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Chd1lQ9CXF7 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC27.17■■□□□ 1.94
Chd1lQ9CXF7 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Chd1lQ9CXF7 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Chd1lQ9CXF7 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC27.15■■□□□ 1.94
Chd1lQ9CXF7 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Chd1lQ9CXF7 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
Chd1lQ9CXF7 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC27.14■■□□□ 1.94
Chd1lQ9CXF7 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Chd1lQ9CXF7 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Chd1lQ9CXF7 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC27.11■■□□□ 1.93
Chd1lQ9CXF7 AC122428.3-201ENSMUST00000215551 2290 ntBASIC27.1■■□□□ 1.93
Chd1lQ9CXF7 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
Chd1lQ9CXF7 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC27.1■■□□□ 1.93
Chd1lQ9CXF7 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC27.09■■□□□ 1.93
Chd1lQ9CXF7 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
Chd1lQ9CXF7 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
Chd1lQ9CXF7 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Chd1lQ9CXF7 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC27.07■■□□□ 1.92
Chd1lQ9CXF7 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC27.07■■□□□ 1.92
Chd1lQ9CXF7 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Chd1lQ9CXF7 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC27.07■■□□□ 1.92
Chd1lQ9CXF7 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Chd1lQ9CXF7 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Chd1lQ9CXF7 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
Chd1lQ9CXF7 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Chd1lQ9CXF7 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Chd1lQ9CXF7 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC27.03■■□□□ 1.92
Chd1lQ9CXF7 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC27.02■■□□□ 1.92
Chd1lQ9CXF7 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC27.01■■□□□ 1.92
Chd1lQ9CXF7 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Chd1lQ9CXF7 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
Chd1lQ9CXF7 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC27■■□□□ 1.91
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms