Protein–RNA interactions for Protein: Q9CXE6

Xrcc3, DNA repair protein XRCC3, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrcc3Q9CXE6 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
Xrcc3Q9CXE6 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Xrcc3Q9CXE6 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Xrcc3Q9CXE6 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Xrcc3Q9CXE6 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Xrcc3Q9CXE6 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Xrcc3Q9CXE6 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Xrcc3Q9CXE6 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Xrcc3Q9CXE6 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Xrcc3Q9CXE6 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Xrcc3Q9CXE6 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Xrcc3Q9CXE6 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Xrcc3Q9CXE6 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Xrcc3Q9CXE6 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Xrcc3Q9CXE6 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Xrcc3Q9CXE6 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Xrcc3Q9CXE6 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Xrcc3Q9CXE6 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Xrcc3Q9CXE6 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.5■□□□□ 0.71
Xrcc3Q9CXE6 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Xrcc3Q9CXE6 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Xrcc3Q9CXE6 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Xrcc3Q9CXE6 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Xrcc3Q9CXE6 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Xrcc3Q9CXE6 Peli2-204ENSMUST00000226513 1320 ntBASIC19.49■□□□□ 0.71
Xrcc3Q9CXE6 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Xrcc3Q9CXE6 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
Xrcc3Q9CXE6 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Xrcc3Q9CXE6 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
Xrcc3Q9CXE6 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Xrcc3Q9CXE6 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Xrcc3Q9CXE6 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Xrcc3Q9CXE6 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Xrcc3Q9CXE6 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Xrcc3Q9CXE6 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Xrcc3Q9CXE6 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Xrcc3Q9CXE6 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC19.42■□□□□ 0.7
Xrcc3Q9CXE6 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Xrcc3Q9CXE6 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Xrcc3Q9CXE6 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Xrcc3Q9CXE6 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Xrcc3Q9CXE6 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Xrcc3Q9CXE6 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Xrcc3Q9CXE6 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Xrcc3Q9CXE6 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC19.39■□□□□ 0.69
Xrcc3Q9CXE6 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Xrcc3Q9CXE6 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Xrcc3Q9CXE6 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Xrcc3Q9CXE6 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC19.37■□□□□ 0.69
Xrcc3Q9CXE6 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Xrcc3Q9CXE6 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC19.36■□□□□ 0.69
Xrcc3Q9CXE6 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Xrcc3Q9CXE6 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Xrcc3Q9CXE6 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Xrcc3Q9CXE6 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Xrcc3Q9CXE6 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Xrcc3Q9CXE6 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19.35■□□□□ 0.69
Xrcc3Q9CXE6 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
Xrcc3Q9CXE6 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Xrcc3Q9CXE6 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.35■□□□□ 0.69
Xrcc3Q9CXE6 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Xrcc3Q9CXE6 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Xrcc3Q9CXE6 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Xrcc3Q9CXE6 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Xrcc3Q9CXE6 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Xrcc3Q9CXE6 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Xrcc3Q9CXE6 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Xrcc3Q9CXE6 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Xrcc3Q9CXE6 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Xrcc3Q9CXE6 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Xrcc3Q9CXE6 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Xrcc3Q9CXE6 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Xrcc3Q9CXE6 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Xrcc3Q9CXE6 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Xrcc3Q9CXE6 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Xrcc3Q9CXE6 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Xrcc3Q9CXE6 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Xrcc3Q9CXE6 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Xrcc3Q9CXE6 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Xrcc3Q9CXE6 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Xrcc3Q9CXE6 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Xrcc3Q9CXE6 Pcf11-205ENSMUST00000208255 1720 ntBASIC19.28■□□□□ 0.68
Xrcc3Q9CXE6 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Xrcc3Q9CXE6 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Xrcc3Q9CXE6 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Xrcc3Q9CXE6 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Xrcc3Q9CXE6 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Xrcc3Q9CXE6 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Xrcc3Q9CXE6 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Xrcc3Q9CXE6 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Xrcc3Q9CXE6 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Xrcc3Q9CXE6 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Xrcc3Q9CXE6 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Xrcc3Q9CXE6 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Xrcc3Q9CXE6 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Xrcc3Q9CXE6 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Xrcc3Q9CXE6 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Xrcc3Q9CXE6 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Xrcc3Q9CXE6 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Xrcc3Q9CXE6 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 71.5 ms