Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Thumpd1Q99J36 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Thumpd1Q99J36 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.59■■□□□ 1.05
Thumpd1Q99J36 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Thumpd1Q99J36 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Thumpd1Q99J36 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Thumpd1Q99J36 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Thumpd1Q99J36 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Thumpd1Q99J36 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Thumpd1Q99J36 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Thumpd1Q99J36 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Thumpd1Q99J36 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Thumpd1Q99J36 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Thumpd1Q99J36 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Thumpd1Q99J36 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.53■■□□□ 1.04
Thumpd1Q99J36 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Thumpd1Q99J36 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Thumpd1Q99J36 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Thumpd1Q99J36 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.53■■□□□ 1.04
Thumpd1Q99J36 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Thumpd1Q99J36 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Thumpd1Q99J36 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Thumpd1Q99J36 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Thumpd1Q99J36 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Thumpd1Q99J36 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Thumpd1Q99J36 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Thumpd1Q99J36 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Thumpd1Q99J36 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Thumpd1Q99J36 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Thumpd1Q99J36 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Thumpd1Q99J36 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Thumpd1Q99J36 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Thumpd1Q99J36 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Thumpd1Q99J36 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Thumpd1Q99J36 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Thumpd1Q99J36 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Thumpd1Q99J36 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Thumpd1Q99J36 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Thumpd1Q99J36 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Thumpd1Q99J36 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Thumpd1Q99J36 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Thumpd1Q99J36 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Thumpd1Q99J36 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Thumpd1Q99J36 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.44■■□□□ 1.02
Thumpd1Q99J36 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Thumpd1Q99J36 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Thumpd1Q99J36 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Thumpd1Q99J36 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC21.43■■□□□ 1.02
Thumpd1Q99J36 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Thumpd1Q99J36 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Thumpd1Q99J36 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Thumpd1Q99J36 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Thumpd1Q99J36 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Thumpd1Q99J36 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.42■■□□□ 1.02
Thumpd1Q99J36 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Thumpd1Q99J36 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Thumpd1Q99J36 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Thumpd1Q99J36 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Thumpd1Q99J36 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Thumpd1Q99J36 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Thumpd1Q99J36 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Thumpd1Q99J36 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Thumpd1Q99J36 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC21.39■■□□□ 1.02
Thumpd1Q99J36 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Thumpd1Q99J36 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.38■■□□□ 1.01
Thumpd1Q99J36 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Thumpd1Q99J36 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Thumpd1Q99J36 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Thumpd1Q99J36 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Thumpd1Q99J36 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Thumpd1Q99J36 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Thumpd1Q99J36 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Thumpd1Q99J36 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Thumpd1Q99J36 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Thumpd1Q99J36 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Thumpd1Q99J36 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Thumpd1Q99J36 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Thumpd1Q99J36 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Thumpd1Q99J36 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Thumpd1Q99J36 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC21.32■■□□□ 1
Thumpd1Q99J36 Gm26115-201ENSMUST00000175605 87 ntBASIC21.32■■□□□ 1
Thumpd1Q99J36 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.31■■□□□ 1
Thumpd1Q99J36 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Thumpd1Q99J36 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC21.31■■□□□ 1
Thumpd1Q99J36 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Thumpd1Q99J36 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Thumpd1Q99J36 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Thumpd1Q99J36 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.29■■□□□ 1
Thumpd1Q99J36 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.29■■□□□ 1
Thumpd1Q99J36 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.29■■□□□ 1
Thumpd1Q99J36 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Thumpd1Q99J36 Gm8109-201ENSMUST00000194076 746 ntBASIC21.28■■□□□ 1
Thumpd1Q99J36 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Thumpd1Q99J36 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.27■■□□□ 1
Thumpd1Q99J36 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Thumpd1Q99J36 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Thumpd1Q99J36 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Thumpd1Q99J36 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.25■□□□□ 0.99
Thumpd1Q99J36 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Thumpd1Q99J36 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms