Protein–RNA interactions for Protein: Q8VHP8

Rab40b, Ras-related protein Rab-40B, mousemouse

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40bQ8VHP8 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rab40bQ8VHP8 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.84■■□□□ 1.09
Rab40bQ8VHP8 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Rab40bQ8VHP8 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Rab40bQ8VHP8 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Rab40bQ8VHP8 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Rab40bQ8VHP8 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Rab40bQ8VHP8 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.81■■□□□ 1.08
Rab40bQ8VHP8 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.81■■□□□ 1.08
Rab40bQ8VHP8 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC21.8■■□□□ 1.08
Rab40bQ8VHP8 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rab40bQ8VHP8 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rab40bQ8VHP8 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rab40bQ8VHP8 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Rab40bQ8VHP8 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rab40bQ8VHP8 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rab40bQ8VHP8 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rab40bQ8VHP8 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rab40bQ8VHP8 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rab40bQ8VHP8 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rab40bQ8VHP8 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Rab40bQ8VHP8 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rab40bQ8VHP8 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Rab40bQ8VHP8 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Rab40bQ8VHP8 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Rab40bQ8VHP8 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Rab40bQ8VHP8 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Rab40bQ8VHP8 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Rab40bQ8VHP8 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rab40bQ8VHP8 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Rab40bQ8VHP8 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rab40bQ8VHP8 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rab40bQ8VHP8 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Rab40bQ8VHP8 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.71■■□□□ 1.07
Rab40bQ8VHP8 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rab40bQ8VHP8 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rab40bQ8VHP8 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.69■■□□□ 1.06
Rab40bQ8VHP8 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Rab40bQ8VHP8 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rab40bQ8VHP8 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rab40bQ8VHP8 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Rab40bQ8VHP8 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rab40bQ8VHP8 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rab40bQ8VHP8 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Rab40bQ8VHP8 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rab40bQ8VHP8 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Rab40bQ8VHP8 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Rab40bQ8VHP8 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rab40bQ8VHP8 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rab40bQ8VHP8 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Rab40bQ8VHP8 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Rab40bQ8VHP8 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rab40bQ8VHP8 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rab40bQ8VHP8 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rab40bQ8VHP8 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Rab40bQ8VHP8 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Rab40bQ8VHP8 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC21.6■■□□□ 1.05
Rab40bQ8VHP8 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rab40bQ8VHP8 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.59■■□□□ 1.05
Rab40bQ8VHP8 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rab40bQ8VHP8 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Rab40bQ8VHP8 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rab40bQ8VHP8 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Rab40bQ8VHP8 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Rab40bQ8VHP8 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Rab40bQ8VHP8 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Rab40bQ8VHP8 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC21.58■■□□□ 1.04
Rab40bQ8VHP8 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rab40bQ8VHP8 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rab40bQ8VHP8 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Rab40bQ8VHP8 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Rab40bQ8VHP8 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Rab40bQ8VHP8 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rab40bQ8VHP8 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Rab40bQ8VHP8 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Rab40bQ8VHP8 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.55■■□□□ 1.04
Rab40bQ8VHP8 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rab40bQ8VHP8 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Rab40bQ8VHP8 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rab40bQ8VHP8 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rab40bQ8VHP8 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Rab40bQ8VHP8 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rab40bQ8VHP8 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rab40bQ8VHP8 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Rab40bQ8VHP8 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.03
Rab40bQ8VHP8 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Rab40bQ8VHP8 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rab40bQ8VHP8 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rab40bQ8VHP8 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rab40bQ8VHP8 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Rab40bQ8VHP8 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Rab40bQ8VHP8 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rab40bQ8VHP8 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC21.5■■□□□ 1.03
Rab40bQ8VHP8 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rab40bQ8VHP8 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rab40bQ8VHP8 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rab40bQ8VHP8 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Rab40bQ8VHP8 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rab40bQ8VHP8 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rab40bQ8VHP8 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms