Protein–RNA interactions for Protein: Q8VCC6

Ccm2l, Cerebral cavernous malformations 2 protein-like, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccm2lQ8VCC6 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC21.52■■□□□ 1.04
Ccm2lQ8VCC6 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ccm2lQ8VCC6 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC21.52■■□□□ 1.04
Ccm2lQ8VCC6 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
Ccm2lQ8VCC6 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Ccm2lQ8VCC6 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ccm2lQ8VCC6 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.5■■□□□ 1.03
Ccm2lQ8VCC6 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Ccm2lQ8VCC6 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Ccm2lQ8VCC6 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Ccm2lQ8VCC6 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ccm2lQ8VCC6 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ccm2lQ8VCC6 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ccm2lQ8VCC6 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ccm2lQ8VCC6 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ccm2lQ8VCC6 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ccm2lQ8VCC6 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC21.46■■□□□ 1.03
Ccm2lQ8VCC6 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Ccm2lQ8VCC6 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ccm2lQ8VCC6 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ccm2lQ8VCC6 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC21.45■■□□□ 1.02
Ccm2lQ8VCC6 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Ccm2lQ8VCC6 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.44■■□□□ 1.02
Ccm2lQ8VCC6 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.44■■□□□ 1.02
Ccm2lQ8VCC6 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC21.42■■□□□ 1.02
Ccm2lQ8VCC6 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Ccm2lQ8VCC6 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ccm2lQ8VCC6 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ccm2lQ8VCC6 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Ccm2lQ8VCC6 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.41■■□□□ 1.02
Ccm2lQ8VCC6 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ccm2lQ8VCC6 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
Ccm2lQ8VCC6 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Ccm2lQ8VCC6 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Ccm2lQ8VCC6 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ccm2lQ8VCC6 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ccm2lQ8VCC6 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ccm2lQ8VCC6 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Ccm2lQ8VCC6 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Ccm2lQ8VCC6 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.36■■□□□ 1.01
Ccm2lQ8VCC6 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ccm2lQ8VCC6 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ccm2lQ8VCC6 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ccm2lQ8VCC6 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Ccm2lQ8VCC6 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ccm2lQ8VCC6 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ccm2lQ8VCC6 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ccm2lQ8VCC6 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ccm2lQ8VCC6 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Ccm2lQ8VCC6 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Ccm2lQ8VCC6 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ccm2lQ8VCC6 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Ccm2lQ8VCC6 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
Ccm2lQ8VCC6 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Ccm2lQ8VCC6 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ccm2lQ8VCC6 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ccm2lQ8VCC6 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ccm2lQ8VCC6 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC21.3■■□□□ 1
Ccm2lQ8VCC6 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Ccm2lQ8VCC6 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC21.3■■□□□ 1
Ccm2lQ8VCC6 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ccm2lQ8VCC6 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ccm2lQ8VCC6 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC21.29■■□□□ 1
Ccm2lQ8VCC6 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ccm2lQ8VCC6 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ccm2lQ8VCC6 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.28■■□□□ 1
Ccm2lQ8VCC6 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.27■■□□□ 1
Ccm2lQ8VCC6 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
Ccm2lQ8VCC6 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
Ccm2lQ8VCC6 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ccm2lQ8VCC6 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ccm2lQ8VCC6 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.25■□□□□ 0.99
Ccm2lQ8VCC6 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ccm2lQ8VCC6 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ccm2lQ8VCC6 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ccm2lQ8VCC6 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ccm2lQ8VCC6 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ccm2lQ8VCC6 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ccm2lQ8VCC6 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Ccm2lQ8VCC6 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Ccm2lQ8VCC6 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Ccm2lQ8VCC6 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Ccm2lQ8VCC6 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ccm2lQ8VCC6 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC21.21■□□□□ 0.99
Ccm2lQ8VCC6 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ccm2lQ8VCC6 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Ccm2lQ8VCC6 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Ccm2lQ8VCC6 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ccm2lQ8VCC6 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ccm2lQ8VCC6 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ccm2lQ8VCC6 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ccm2lQ8VCC6 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ccm2lQ8VCC6 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ccm2lQ8VCC6 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ccm2lQ8VCC6 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ccm2lQ8VCC6 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ccm2lQ8VCC6 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ccm2lQ8VCC6 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.17■□□□□ 0.98
Ccm2lQ8VCC6 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ccm2lQ8VCC6 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms