Protein–RNA interactions for Protein: Q8K4Q6

Neil1, Endonuclease 8-like 1, mousemouse

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Neil1Q8K4Q6 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Neil1Q8K4Q6 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC21■□□□□ 0.95
Neil1Q8K4Q6 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21■□□□□ 0.95
Neil1Q8K4Q6 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Neil1Q8K4Q6 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Neil1Q8K4Q6 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Neil1Q8K4Q6 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Neil1Q8K4Q6 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Neil1Q8K4Q6 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Neil1Q8K4Q6 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Neil1Q8K4Q6 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Neil1Q8K4Q6 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Neil1Q8K4Q6 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC20.94■□□□□ 0.94
Neil1Q8K4Q6 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Neil1Q8K4Q6 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Neil1Q8K4Q6 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Neil1Q8K4Q6 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Neil1Q8K4Q6 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Neil1Q8K4Q6 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
Neil1Q8K4Q6 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Neil1Q8K4Q6 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Neil1Q8K4Q6 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Neil1Q8K4Q6 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Neil1Q8K4Q6 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Neil1Q8K4Q6 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Neil1Q8K4Q6 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Neil1Q8K4Q6 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Neil1Q8K4Q6 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Neil1Q8K4Q6 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Neil1Q8K4Q6 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
Neil1Q8K4Q6 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Neil1Q8K4Q6 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Neil1Q8K4Q6 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Neil1Q8K4Q6 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Neil1Q8K4Q6 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC20.85■□□□□ 0.93
Neil1Q8K4Q6 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Neil1Q8K4Q6 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Neil1Q8K4Q6 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Neil1Q8K4Q6 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Neil1Q8K4Q6 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20.84■□□□□ 0.93
Neil1Q8K4Q6 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Neil1Q8K4Q6 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Neil1Q8K4Q6 Tdp2-203ENSMUST00000223804 1136 ntBASIC20.83■□□□□ 0.93
Neil1Q8K4Q6 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Neil1Q8K4Q6 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC20.82■□□□□ 0.92
Neil1Q8K4Q6 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Neil1Q8K4Q6 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC20.82■□□□□ 0.92
Neil1Q8K4Q6 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Neil1Q8K4Q6 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Neil1Q8K4Q6 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.8■□□□□ 0.92
Neil1Q8K4Q6 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Neil1Q8K4Q6 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Neil1Q8K4Q6 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Neil1Q8K4Q6 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC20.79■□□□□ 0.92
Neil1Q8K4Q6 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Neil1Q8K4Q6 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Neil1Q8K4Q6 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Neil1Q8K4Q6 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Neil1Q8K4Q6 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Neil1Q8K4Q6 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Neil1Q8K4Q6 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Neil1Q8K4Q6 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.78■□□□□ 0.92
Neil1Q8K4Q6 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Neil1Q8K4Q6 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Neil1Q8K4Q6 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.76■□□□□ 0.91
Neil1Q8K4Q6 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Neil1Q8K4Q6 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Neil1Q8K4Q6 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Neil1Q8K4Q6 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Neil1Q8K4Q6 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Neil1Q8K4Q6 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Neil1Q8K4Q6 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Neil1Q8K4Q6 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Neil1Q8K4Q6 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Neil1Q8K4Q6 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC20.72■□□□□ 0.91
Neil1Q8K4Q6 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Neil1Q8K4Q6 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Neil1Q8K4Q6 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Neil1Q8K4Q6 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.71■□□□□ 0.91
Neil1Q8K4Q6 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Neil1Q8K4Q6 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Neil1Q8K4Q6 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Neil1Q8K4Q6 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Neil1Q8K4Q6 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Neil1Q8K4Q6 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Neil1Q8K4Q6 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Neil1Q8K4Q6 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Neil1Q8K4Q6 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Neil1Q8K4Q6 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Neil1Q8K4Q6 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.66■□□□□ 0.9
Neil1Q8K4Q6 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Neil1Q8K4Q6 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC20.66■□□□□ 0.9
Neil1Q8K4Q6 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Neil1Q8K4Q6 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Neil1Q8K4Q6 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Neil1Q8K4Q6 Pcf11-205ENSMUST00000208255 1720 ntBASIC20.65■□□□□ 0.9
Neil1Q8K4Q6 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Neil1Q8K4Q6 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Neil1Q8K4Q6 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Neil1Q8K4Q6 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms