Protein–RNA interactions for Protein: Q8CBM3

Gm16223, MCG145574 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm16223Q8CBM3 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Gm16223Q8CBM3 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gm16223Q8CBM3 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gm16223Q8CBM3 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gm16223Q8CBM3 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
Gm16223Q8CBM3 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Gm16223Q8CBM3 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Gm16223Q8CBM3 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Gm16223Q8CBM3 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Gm16223Q8CBM3 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC17.39■□□□□ 0.37
Gm16223Q8CBM3 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
Gm16223Q8CBM3 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm16223Q8CBM3 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Gm16223Q8CBM3 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm16223Q8CBM3 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm16223Q8CBM3 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Gm16223Q8CBM3 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm16223Q8CBM3 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC17.35■□□□□ 0.37
Gm16223Q8CBM3 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm16223Q8CBM3 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm16223Q8CBM3 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm16223Q8CBM3 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Gm16223Q8CBM3 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm16223Q8CBM3 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Gm16223Q8CBM3 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Gm16223Q8CBM3 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm16223Q8CBM3 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm16223Q8CBM3 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Gm16223Q8CBM3 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Gm16223Q8CBM3 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Gm16223Q8CBM3 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC17.33■□□□□ 0.36
Gm16223Q8CBM3 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC17.32■□□□□ 0.36
Gm16223Q8CBM3 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm16223Q8CBM3 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm16223Q8CBM3 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm16223Q8CBM3 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC17.31■□□□□ 0.36
Gm16223Q8CBM3 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm16223Q8CBM3 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm16223Q8CBM3 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm16223Q8CBM3 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm16223Q8CBM3 Pcf11-205ENSMUST00000208255 1720 ntBASIC17.3■□□□□ 0.36
Gm16223Q8CBM3 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm16223Q8CBM3 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm16223Q8CBM3 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm16223Q8CBM3 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Gm16223Q8CBM3 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm16223Q8CBM3 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC17.28■□□□□ 0.36
Gm16223Q8CBM3 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gm16223Q8CBM3 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gm16223Q8CBM3 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm16223Q8CBM3 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm16223Q8CBM3 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm16223Q8CBM3 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Gm16223Q8CBM3 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm16223Q8CBM3 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Gm16223Q8CBM3 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm16223Q8CBM3 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm16223Q8CBM3 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Gm16223Q8CBM3 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Gm16223Q8CBM3 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Gm16223Q8CBM3 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm16223Q8CBM3 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Gm16223Q8CBM3 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Gm16223Q8CBM3 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Gm16223Q8CBM3 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm16223Q8CBM3 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Gm16223Q8CBM3 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm16223Q8CBM3 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm16223Q8CBM3 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Gm16223Q8CBM3 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Gm16223Q8CBM3 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm16223Q8CBM3 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm16223Q8CBM3 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm16223Q8CBM3 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm16223Q8CBM3 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Gm16223Q8CBM3 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm16223Q8CBM3 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm16223Q8CBM3 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm16223Q8CBM3 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Gm16223Q8CBM3 AC122428.3-201ENSMUST00000215551 2290 ntBASIC17.21■□□□□ 0.34
Gm16223Q8CBM3 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC17.2■□□□□ 0.34
Gm16223Q8CBM3 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gm16223Q8CBM3 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Gm16223Q8CBM3 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gm16223Q8CBM3 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Gm16223Q8CBM3 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Gm16223Q8CBM3 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Gm16223Q8CBM3 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Gm16223Q8CBM3 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm16223Q8CBM3 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm16223Q8CBM3 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Gm16223Q8CBM3 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Gm16223Q8CBM3 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Gm16223Q8CBM3 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm16223Q8CBM3 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm16223Q8CBM3 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm16223Q8CBM3 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Gm16223Q8CBM3 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm16223Q8CBM3 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm16223Q8CBM3 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms