Protein–RNA interactions for Protein: Q8CA03

Slc46a2, Thymic stromal cotransporter protein, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a2Q8CA03 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
Slc46a2Q8CA03 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Slc46a2Q8CA03 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
Slc46a2Q8CA03 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Slc46a2Q8CA03 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC23.36■■□□□ 1.33
Slc46a2Q8CA03 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Slc46a2Q8CA03 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
Slc46a2Q8CA03 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Slc46a2Q8CA03 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Slc46a2Q8CA03 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Slc46a2Q8CA03 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
Slc46a2Q8CA03 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Slc46a2Q8CA03 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Slc46a2Q8CA03 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
Slc46a2Q8CA03 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
Slc46a2Q8CA03 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Slc46a2Q8CA03 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Slc46a2Q8CA03 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Slc46a2Q8CA03 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Slc46a2Q8CA03 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Slc46a2Q8CA03 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Slc46a2Q8CA03 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Slc46a2Q8CA03 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC23.29■■□□□ 1.32
Slc46a2Q8CA03 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Slc46a2Q8CA03 Pcf11-205ENSMUST00000208255 1720 ntBASIC23.28■■□□□ 1.32
Slc46a2Q8CA03 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Slc46a2Q8CA03 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Slc46a2Q8CA03 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Slc46a2Q8CA03 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
Slc46a2Q8CA03 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
Slc46a2Q8CA03 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
Slc46a2Q8CA03 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Slc46a2Q8CA03 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Slc46a2Q8CA03 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Slc46a2Q8CA03 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Slc46a2Q8CA03 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Slc46a2Q8CA03 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Slc46a2Q8CA03 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Slc46a2Q8CA03 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Slc46a2Q8CA03 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Slc46a2Q8CA03 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
Slc46a2Q8CA03 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Slc46a2Q8CA03 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Slc46a2Q8CA03 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Slc46a2Q8CA03 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Slc46a2Q8CA03 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
Slc46a2Q8CA03 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Slc46a2Q8CA03 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Slc46a2Q8CA03 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Slc46a2Q8CA03 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
Slc46a2Q8CA03 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Slc46a2Q8CA03 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC23.14■■□□□ 1.29
Slc46a2Q8CA03 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Slc46a2Q8CA03 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
Slc46a2Q8CA03 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Slc46a2Q8CA03 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Slc46a2Q8CA03 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Slc46a2Q8CA03 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Slc46a2Q8CA03 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Slc46a2Q8CA03 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Slc46a2Q8CA03 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC23.11■■□□□ 1.29
Slc46a2Q8CA03 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Slc46a2Q8CA03 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Slc46a2Q8CA03 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Slc46a2Q8CA03 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Slc46a2Q8CA03 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Slc46a2Q8CA03 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC23.09■■□□□ 1.29
Slc46a2Q8CA03 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Slc46a2Q8CA03 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Slc46a2Q8CA03 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Slc46a2Q8CA03 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC23.07■■□□□ 1.28
Slc46a2Q8CA03 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC23.07■■□□□ 1.28
Slc46a2Q8CA03 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Slc46a2Q8CA03 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Slc46a2Q8CA03 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Slc46a2Q8CA03 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Slc46a2Q8CA03 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Slc46a2Q8CA03 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Slc46a2Q8CA03 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Slc46a2Q8CA03 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Slc46a2Q8CA03 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Slc46a2Q8CA03 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Slc46a2Q8CA03 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Slc46a2Q8CA03 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Slc46a2Q8CA03 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Slc46a2Q8CA03 Gm24804-201ENSMUST00000174982 85 ntBASIC23.03■■□□□ 1.28
Slc46a2Q8CA03 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Slc46a2Q8CA03 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Slc46a2Q8CA03 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Slc46a2Q8CA03 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Slc46a2Q8CA03 AC122428.3-201ENSMUST00000215551 2290 ntBASIC23.02■■□□□ 1.28
Slc46a2Q8CA03 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Slc46a2Q8CA03 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Slc46a2Q8CA03 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Slc46a2Q8CA03 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC23■■□□□ 1.27
Slc46a2Q8CA03 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC23■■□□□ 1.27
Slc46a2Q8CA03 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC23■■□□□ 1.27
Slc46a2Q8CA03 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Slc46a2Q8CA03 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC22.98■■□□□ 1.27
Slc46a2Q8CA03 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms