Protein–RNA interactions for Protein: Q61189

Clns1a, Methylosome subunit pICln, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clns1aQ61189 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Clns1aQ61189 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Clns1aQ61189 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Clns1aQ61189 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Clns1aQ61189 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Clns1aQ61189 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Clns1aQ61189 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Clns1aQ61189 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Clns1aQ61189 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Clns1aQ61189 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Clns1aQ61189 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.57■□□□□ 0.88
Clns1aQ61189 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Clns1aQ61189 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Clns1aQ61189 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC20.57■□□□□ 0.88
Clns1aQ61189 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Clns1aQ61189 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Clns1aQ61189 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.56■□□□□ 0.88
Clns1aQ61189 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Clns1aQ61189 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clns1aQ61189 Gm27322-201ENSMUST00000184007 104 ntBASIC20.55■□□□□ 0.88
Clns1aQ61189 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Clns1aQ61189 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Clns1aQ61189 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Clns1aQ61189 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
Clns1aQ61189 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Clns1aQ61189 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Clns1aQ61189 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Clns1aQ61189 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Clns1aQ61189 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.54■□□□□ 0.88
Clns1aQ61189 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Clns1aQ61189 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Clns1aQ61189 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Clns1aQ61189 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Clns1aQ61189 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Clns1aQ61189 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Clns1aQ61189 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Clns1aQ61189 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Clns1aQ61189 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Clns1aQ61189 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC20.51■□□□□ 0.87
Clns1aQ61189 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Clns1aQ61189 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Clns1aQ61189 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Clns1aQ61189 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Clns1aQ61189 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC20.48■□□□□ 0.87
Clns1aQ61189 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Clns1aQ61189 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Clns1aQ61189 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.48■□□□□ 0.87
Clns1aQ61189 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC20.46■□□□□ 0.87
Clns1aQ61189 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Clns1aQ61189 Gm17082-201ENSMUST00000166043 1091 ntBASIC20.46■□□□□ 0.87
Clns1aQ61189 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Clns1aQ61189 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Clns1aQ61189 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Clns1aQ61189 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Clns1aQ61189 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Clns1aQ61189 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC20.43■□□□□ 0.86
Clns1aQ61189 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Clns1aQ61189 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Clns1aQ61189 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Clns1aQ61189 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Clns1aQ61189 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Clns1aQ61189 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Clns1aQ61189 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Clns1aQ61189 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
Clns1aQ61189 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Clns1aQ61189 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Clns1aQ61189 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC20.38■□□□□ 0.85
Clns1aQ61189 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
Clns1aQ61189 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Clns1aQ61189 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Clns1aQ61189 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Clns1aQ61189 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Clns1aQ61189 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.37■□□□□ 0.85
Clns1aQ61189 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Clns1aQ61189 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
Clns1aQ61189 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC20.36■□□□□ 0.85
Clns1aQ61189 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Clns1aQ61189 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Clns1aQ61189 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Clns1aQ61189 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Clns1aQ61189 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Clns1aQ61189 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Clns1aQ61189 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Clns1aQ61189 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Clns1aQ61189 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Clns1aQ61189 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC20.31■□□□□ 0.84
Clns1aQ61189 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Clns1aQ61189 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Clns1aQ61189 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Clns1aQ61189 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Clns1aQ61189 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Clns1aQ61189 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Clns1aQ61189 Peli2-204ENSMUST00000226513 1320 ntBASIC20.28■□□□□ 0.84
Clns1aQ61189 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Clns1aQ61189 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Clns1aQ61189 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Clns1aQ61189 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Clns1aQ61189 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Clns1aQ61189 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.27■□□□□ 0.84
Clns1aQ61189 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 123 ms