Protein–RNA interactions for Protein: Q61112

Sdf4, 45 kDa calcium-binding protein, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4Q61112 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC24.66■■□□□ 1.54
Sdf4Q61112 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
Sdf4Q61112 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Sdf4Q61112 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Sdf4Q61112 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Sdf4Q61112 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Sdf4Q61112 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
Sdf4Q61112 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
Sdf4Q61112 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
Sdf4Q61112 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC24.65■■□□□ 1.54
Sdf4Q61112 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Sdf4Q61112 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Sdf4Q61112 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
Sdf4Q61112 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Sdf4Q61112 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Sdf4Q61112 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC24.63■■□□□ 1.53
Sdf4Q61112 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC24.63■■□□□ 1.53
Sdf4Q61112 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC24.62■■□□□ 1.53
Sdf4Q61112 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Sdf4Q61112 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC24.61■■□□□ 1.53
Sdf4Q61112 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Sdf4Q61112 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC24.6■■□□□ 1.53
Sdf4Q61112 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Sdf4Q61112 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC24.6■■□□□ 1.53
Sdf4Q61112 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Sdf4Q61112 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Sdf4Q61112 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Sdf4Q61112 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Sdf4Q61112 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Sdf4Q61112 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
Sdf4Q61112 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC24.57■■□□□ 1.52
Sdf4Q61112 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Sdf4Q61112 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
Sdf4Q61112 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC24.55■■□□□ 1.52
Sdf4Q61112 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
Sdf4Q61112 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Sdf4Q61112 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC24.55■■□□□ 1.52
Sdf4Q61112 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Sdf4Q61112 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Sdf4Q61112 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Sdf4Q61112 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Sdf4Q61112 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC24.52■■□□□ 1.52
Sdf4Q61112 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Sdf4Q61112 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
Sdf4Q61112 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Sdf4Q61112 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
Sdf4Q61112 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC24.5■■□□□ 1.51
Sdf4Q61112 Amer2-203ENSMUST00000225247 2662 ntBASIC24.5■■□□□ 1.51
Sdf4Q61112 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Sdf4Q61112 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Sdf4Q61112 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Sdf4Q61112 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Sdf4Q61112 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Sdf4Q61112 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Sdf4Q61112 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Sdf4Q61112 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC24.47■■□□□ 1.51
Sdf4Q61112 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Sdf4Q61112 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Sdf4Q61112 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Sdf4Q61112 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Sdf4Q61112 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
Sdf4Q61112 Pcf11-205ENSMUST00000208255 1720 ntBASIC24.41■■□□□ 1.5
Sdf4Q61112 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC24.41■■□□□ 1.5
Sdf4Q61112 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC24.41■■□□□ 1.5
Sdf4Q61112 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Sdf4Q61112 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Sdf4Q61112 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
Sdf4Q61112 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Sdf4Q61112 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Sdf4Q61112 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Sdf4Q61112 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC24.38■■□□□ 1.49
Sdf4Q61112 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Sdf4Q61112 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC24.38■■□□□ 1.49
Sdf4Q61112 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC24.37■■□□□ 1.49
Sdf4Q61112 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Sdf4Q61112 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Sdf4Q61112 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Sdf4Q61112 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC24.37■■□□□ 1.49
Sdf4Q61112 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Sdf4Q61112 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Sdf4Q61112 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Sdf4Q61112 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC24.36■■□□□ 1.49
Sdf4Q61112 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Sdf4Q61112 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Sdf4Q61112 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.49
Sdf4Q61112 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC24.33■■□□□ 1.49
Sdf4Q61112 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Sdf4Q61112 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Sdf4Q61112 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC24.32■■□□□ 1.48
Sdf4Q61112 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
Sdf4Q61112 Fezf2-202ENSMUST00000224023 1917 ntBASIC24.31■■□□□ 1.48
Sdf4Q61112 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
Sdf4Q61112 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
Sdf4Q61112 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Sdf4Q61112 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Sdf4Q61112 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC24.28■■□□□ 1.48
Sdf4Q61112 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC24.28■■□□□ 1.48
Sdf4Q61112 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Sdf4Q61112 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Sdf4Q61112 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms