Protein–RNA interactions for Protein: Q5U452

Trp53rka, MCG14616, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trp53rkaQ5U452 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Trp53rkaQ5U452 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trp53rkaQ5U452 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC18.93■□□□□ 0.62
Trp53rkaQ5U452 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trp53rkaQ5U452 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trp53rkaQ5U452 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trp53rkaQ5U452 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trp53rkaQ5U452 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.91■□□□□ 0.62
Trp53rkaQ5U452 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trp53rkaQ5U452 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trp53rkaQ5U452 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trp53rkaQ5U452 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trp53rkaQ5U452 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Trp53rkaQ5U452 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trp53rkaQ5U452 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trp53rkaQ5U452 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trp53rkaQ5U452 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trp53rkaQ5U452 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trp53rkaQ5U452 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Trp53rkaQ5U452 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trp53rkaQ5U452 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trp53rkaQ5U452 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trp53rkaQ5U452 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trp53rkaQ5U452 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC18.85■□□□□ 0.61
Trp53rkaQ5U452 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.85■□□□□ 0.61
Trp53rkaQ5U452 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trp53rkaQ5U452 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trp53rkaQ5U452 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Trp53rkaQ5U452 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trp53rkaQ5U452 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trp53rkaQ5U452 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trp53rkaQ5U452 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trp53rkaQ5U452 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Trp53rkaQ5U452 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trp53rkaQ5U452 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trp53rkaQ5U452 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Trp53rkaQ5U452 Mipep-204ENSMUST00000225043 1548 ntBASIC18.81■□□□□ 0.6
Trp53rkaQ5U452 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trp53rkaQ5U452 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trp53rkaQ5U452 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trp53rkaQ5U452 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trp53rkaQ5U452 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trp53rkaQ5U452 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trp53rkaQ5U452 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trp53rkaQ5U452 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Trp53rkaQ5U452 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trp53rkaQ5U452 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.78■□□□□ 0.6
Trp53rkaQ5U452 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trp53rkaQ5U452 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Trp53rkaQ5U452 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trp53rkaQ5U452 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.77■□□□□ 0.6
Trp53rkaQ5U452 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trp53rkaQ5U452 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trp53rkaQ5U452 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Trp53rkaQ5U452 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trp53rkaQ5U452 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trp53rkaQ5U452 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trp53rkaQ5U452 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trp53rkaQ5U452 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trp53rkaQ5U452 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trp53rkaQ5U452 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trp53rkaQ5U452 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
Trp53rkaQ5U452 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trp53rkaQ5U452 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trp53rkaQ5U452 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trp53rkaQ5U452 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
Trp53rkaQ5U452 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC18.73■□□□□ 0.59
Trp53rkaQ5U452 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trp53rkaQ5U452 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Trp53rkaQ5U452 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trp53rkaQ5U452 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trp53rkaQ5U452 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trp53rkaQ5U452 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trp53rkaQ5U452 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trp53rkaQ5U452 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trp53rkaQ5U452 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC18.7■□□□□ 0.58
Trp53rkaQ5U452 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trp53rkaQ5U452 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Trp53rkaQ5U452 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.7■□□□□ 0.58
Trp53rkaQ5U452 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trp53rkaQ5U452 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Trp53rkaQ5U452 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Trp53rkaQ5U452 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trp53rkaQ5U452 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trp53rkaQ5U452 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trp53rkaQ5U452 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trp53rkaQ5U452 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trp53rkaQ5U452 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Trp53rkaQ5U452 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trp53rkaQ5U452 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
Trp53rkaQ5U452 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trp53rkaQ5U452 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trp53rkaQ5U452 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trp53rkaQ5U452 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trp53rkaQ5U452 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trp53rkaQ5U452 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trp53rkaQ5U452 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Trp53rkaQ5U452 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trp53rkaQ5U452 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trp53rkaQ5U452 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms