Protein–RNA interactions for Protein: Q3UWR2

Khdc1a, KH homology domain-containing protein 1A, mousemouse

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc1aQ3UWR2 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Khdc1aQ3UWR2 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC18.11■□□□□ 0.49
Khdc1aQ3UWR2 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Khdc1aQ3UWR2 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Khdc1aQ3UWR2 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Khdc1aQ3UWR2 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC18.1■□□□□ 0.49
Khdc1aQ3UWR2 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Khdc1aQ3UWR2 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Khdc1aQ3UWR2 Gm17082-201ENSMUST00000166043 1091 ntBASIC18.09■□□□□ 0.49
Khdc1aQ3UWR2 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Khdc1aQ3UWR2 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Khdc1aQ3UWR2 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Khdc1aQ3UWR2 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Khdc1aQ3UWR2 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Khdc1aQ3UWR2 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Khdc1aQ3UWR2 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Khdc1aQ3UWR2 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Khdc1aQ3UWR2 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Khdc1aQ3UWR2 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC18.06■□□□□ 0.48
Khdc1aQ3UWR2 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Khdc1aQ3UWR2 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Khdc1aQ3UWR2 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Khdc1aQ3UWR2 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Khdc1aQ3UWR2 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Khdc1aQ3UWR2 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Khdc1aQ3UWR2 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC18.05■□□□□ 0.48
Khdc1aQ3UWR2 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Khdc1aQ3UWR2 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Khdc1aQ3UWR2 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Khdc1aQ3UWR2 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Khdc1aQ3UWR2 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Khdc1aQ3UWR2 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Khdc1aQ3UWR2 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Khdc1aQ3UWR2 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Khdc1aQ3UWR2 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Khdc1aQ3UWR2 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
Khdc1aQ3UWR2 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Khdc1aQ3UWR2 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC18.02■□□□□ 0.48
Khdc1aQ3UWR2 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC18.02■□□□□ 0.48
Khdc1aQ3UWR2 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Khdc1aQ3UWR2 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Khdc1aQ3UWR2 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Khdc1aQ3UWR2 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Khdc1aQ3UWR2 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Khdc1aQ3UWR2 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Khdc1aQ3UWR2 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Khdc1aQ3UWR2 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Khdc1aQ3UWR2 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Khdc1aQ3UWR2 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Khdc1aQ3UWR2 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Khdc1aQ3UWR2 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Khdc1aQ3UWR2 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Khdc1aQ3UWR2 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Khdc1aQ3UWR2 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Khdc1aQ3UWR2 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Khdc1aQ3UWR2 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Khdc1aQ3UWR2 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Khdc1aQ3UWR2 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Khdc1aQ3UWR2 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Khdc1aQ3UWR2 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Khdc1aQ3UWR2 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Khdc1aQ3UWR2 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Khdc1aQ3UWR2 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Khdc1aQ3UWR2 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Khdc1aQ3UWR2 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Khdc1aQ3UWR2 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Khdc1aQ3UWR2 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Khdc1aQ3UWR2 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Khdc1aQ3UWR2 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Khdc1aQ3UWR2 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Khdc1aQ3UWR2 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC17.91■□□□□ 0.46
Khdc1aQ3UWR2 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Khdc1aQ3UWR2 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC17.9■□□□□ 0.46
Khdc1aQ3UWR2 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Khdc1aQ3UWR2 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
Khdc1aQ3UWR2 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Khdc1aQ3UWR2 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Khdc1aQ3UWR2 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Khdc1aQ3UWR2 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Khdc1aQ3UWR2 Peli2-204ENSMUST00000226513 1320 ntBASIC17.88■□□□□ 0.45
Khdc1aQ3UWR2 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
Khdc1aQ3UWR2 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Khdc1aQ3UWR2 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Khdc1aQ3UWR2 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Khdc1aQ3UWR2 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Khdc1aQ3UWR2 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Khdc1aQ3UWR2 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Khdc1aQ3UWR2 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Khdc1aQ3UWR2 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Khdc1aQ3UWR2 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Khdc1aQ3UWR2 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC17.86■□□□□ 0.45
Khdc1aQ3UWR2 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC17.85■□□□□ 0.45
Khdc1aQ3UWR2 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Khdc1aQ3UWR2 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Khdc1aQ3UWR2 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
Khdc1aQ3UWR2 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
Khdc1aQ3UWR2 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Khdc1aQ3UWR2 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Khdc1aQ3UWR2 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC17.82■□□□□ 0.44
Khdc1aQ3UWR2 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms