Protein–RNA interactions for Protein: Q3URY0

Rtl4, Retrotransposon Gag-like protein 4, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl4Q3URY0 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rtl4Q3URY0 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Rtl4Q3URY0 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Rtl4Q3URY0 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Rtl4Q3URY0 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Rtl4Q3URY0 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rtl4Q3URY0 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rtl4Q3URY0 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rtl4Q3URY0 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rtl4Q3URY0 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rtl4Q3URY0 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Rtl4Q3URY0 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rtl4Q3URY0 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rtl4Q3URY0 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Rtl4Q3URY0 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rtl4Q3URY0 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC19.54■□□□□ 0.72
Rtl4Q3URY0 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rtl4Q3URY0 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC19.53■□□□□ 0.72
Rtl4Q3URY0 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Rtl4Q3URY0 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.71
Rtl4Q3URY0 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rtl4Q3URY0 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rtl4Q3URY0 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rtl4Q3URY0 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Rtl4Q3URY0 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Rtl4Q3URY0 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Rtl4Q3URY0 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.49■□□□□ 0.71
Rtl4Q3URY0 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rtl4Q3URY0 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rtl4Q3URY0 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rtl4Q3URY0 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Rtl4Q3URY0 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rtl4Q3URY0 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Rtl4Q3URY0 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Rtl4Q3URY0 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rtl4Q3URY0 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rtl4Q3URY0 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19.44■□□□□ 0.7
Rtl4Q3URY0 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Rtl4Q3URY0 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rtl4Q3URY0 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Rtl4Q3URY0 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
Rtl4Q3URY0 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Rtl4Q3URY0 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rtl4Q3URY0 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Rtl4Q3URY0 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Rtl4Q3URY0 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rtl4Q3URY0 Pcf11-205ENSMUST00000208255 1720 ntBASIC19.42■□□□□ 0.7
Rtl4Q3URY0 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Rtl4Q3URY0 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rtl4Q3URY0 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rtl4Q3URY0 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC19.41■□□□□ 0.7
Rtl4Q3URY0 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Rtl4Q3URY0 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rtl4Q3URY0 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rtl4Q3URY0 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rtl4Q3URY0 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rtl4Q3URY0 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rtl4Q3URY0 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC19.4■□□□□ 0.7
Rtl4Q3URY0 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Rtl4Q3URY0 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rtl4Q3URY0 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Rtl4Q3URY0 Zfp131-205ENSMUST00000223812 663 ntBASIC19.38■□□□□ 0.69
Rtl4Q3URY0 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rtl4Q3URY0 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rtl4Q3URY0 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC19.37■□□□□ 0.69
Rtl4Q3URY0 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rtl4Q3URY0 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Rtl4Q3URY0 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rtl4Q3URY0 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rtl4Q3URY0 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Rtl4Q3URY0 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Rtl4Q3URY0 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Rtl4Q3URY0 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Rtl4Q3URY0 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rtl4Q3URY0 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Rtl4Q3URY0 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rtl4Q3URY0 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rtl4Q3URY0 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Rtl4Q3URY0 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rtl4Q3URY0 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC19.33■□□□□ 0.69
Rtl4Q3URY0 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rtl4Q3URY0 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Rtl4Q3URY0 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rtl4Q3URY0 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rtl4Q3URY0 AC153890.1-201ENSMUST00000220021 2469 ntBASIC19.32■□□□□ 0.68
Rtl4Q3URY0 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rtl4Q3URY0 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC19.31■□□□□ 0.68
Rtl4Q3URY0 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC19.29■□□□□ 0.68
Rtl4Q3URY0 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rtl4Q3URY0 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rtl4Q3URY0 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rtl4Q3URY0 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Rtl4Q3URY0 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.28■□□□□ 0.68
Rtl4Q3URY0 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rtl4Q3URY0 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rtl4Q3URY0 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rtl4Q3URY0 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Rtl4Q3URY0 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rtl4Q3URY0 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rtl4Q3URY0 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 9.6 ms