Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ush2AQ2QI47 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC13.95□□□□□ -0.18
Ush2AQ2QI47 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ush2AQ2QI47 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ush2AQ2QI47 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ush2AQ2QI47 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC13.94□□□□□ -0.18
Ush2AQ2QI47 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ush2AQ2QI47 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC13.93□□□□□ -0.18
Ush2AQ2QI47 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ush2AQ2QI47 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ush2AQ2QI47 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ush2AQ2QI47 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ush2AQ2QI47 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ush2AQ2QI47 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC13.91□□□□□ -0.18
Ush2AQ2QI47 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC13.91□□□□□ -0.18
Ush2AQ2QI47 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC13.91□□□□□ -0.18
Ush2AQ2QI47 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ush2AQ2QI47 Gm9806-201ENSMUST00000051080 552 ntBASIC13.91□□□□□ -0.18
Ush2AQ2QI47 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Ush2AQ2QI47 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ush2AQ2QI47 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ush2AQ2QI47 Scarna2-201ENSMUST00000157560 414 ntBASIC13.9□□□□□ -0.18
Ush2AQ2QI47 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC13.89□□□□□ -0.19
Ush2AQ2QI47 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ush2AQ2QI47 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ush2AQ2QI47 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ush2AQ2QI47 Gm7332-201ENSMUST00000118351 454 ntBASIC13.87□□□□□ -0.19
Ush2AQ2QI47 Gm11687-201ENSMUST00000118911 886 ntBASIC13.87□□□□□ -0.19
Ush2AQ2QI47 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ush2AQ2QI47 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ush2AQ2QI47 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC13.87□□□□□ -0.19
Ush2AQ2QI47 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
Ush2AQ2QI47 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ush2AQ2QI47 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ush2AQ2QI47 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ush2AQ2QI47 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
Ush2AQ2QI47 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC13.86□□□□□ -0.19
Ush2AQ2QI47 Gm6345-201ENSMUST00000180378 1691 ntBASIC13.86□□□□□ -0.19
Ush2AQ2QI47 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Ush2AQ2QI47 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ush2AQ2QI47 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ush2AQ2QI47 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ush2AQ2QI47 AC131739.1-201ENSMUST00000221692 1245 ntBASIC13.85□□□□□ -0.19
Ush2AQ2QI47 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC13.85□□□□□ -0.19
Ush2AQ2QI47 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC13.85□□□□□ -0.19
Ush2AQ2QI47 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC13.84□□□□□ -0.19
Ush2AQ2QI47 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC13.84□□□□□ -0.19
Ush2AQ2QI47 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ush2AQ2QI47 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ush2AQ2QI47 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC13.83□□□□□ -0.19
Ush2AQ2QI47 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC13.83□□□□□ -0.19
Ush2AQ2QI47 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ush2AQ2QI47 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ush2AQ2QI47 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Ush2AQ2QI47 Gm27502-201ENSMUST00000183495 199 ntBASIC13.82□□□□□ -0.2
Ush2AQ2QI47 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ush2AQ2QI47 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC13.81□□□□□ -0.2
Ush2AQ2QI47 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC13.81□□□□□ -0.2
Ush2AQ2QI47 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC13.81□□□□□ -0.2
Ush2AQ2QI47 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC13.8□□□□□ -0.2
Ush2AQ2QI47 AC093043.1-201ENSMUST00000226700 898 ntBASIC13.8□□□□□ -0.2
Ush2AQ2QI47 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ush2AQ2QI47 Gm15546-201ENSMUST00000122095 826 ntBASIC13.79□□□□□ -0.2
Ush2AQ2QI47 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC13.79□□□□□ -0.2
Ush2AQ2QI47 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Ush2AQ2QI47 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ush2AQ2QI47 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ush2AQ2QI47 Gm15820-201ENSMUST00000201566 728 ntBASIC13.78□□□□□ -0.2
Ush2AQ2QI47 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC13.78□□□□□ -0.2
Ush2AQ2QI47 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ush2AQ2QI47 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Ush2AQ2QI47 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC13.77□□□□□ -0.21
Ush2AQ2QI47 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC13.77□□□□□ -0.21
Ush2AQ2QI47 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Ush2AQ2QI47 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ush2AQ2QI47 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Ush2AQ2QI47 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ush2AQ2QI47 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ush2AQ2QI47 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ush2AQ2QI47 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC13.75□□□□□ -0.21
Ush2AQ2QI47 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ush2AQ2QI47 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ush2AQ2QI47 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ush2AQ2QI47 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ush2AQ2QI47 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ush2AQ2QI47 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ush2AQ2QI47 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ush2AQ2QI47 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ush2AQ2QI47 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
Ush2AQ2QI47 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC13.72□□□□□ -0.21
Ush2AQ2QI47 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ush2AQ2QI47 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC13.72□□□□□ -0.21
Ush2AQ2QI47 Gm16437-201ENSMUST00000025669 507 ntBASIC13.72□□□□□ -0.21
Ush2AQ2QI47 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ush2AQ2QI47 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ush2AQ2QI47 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ush2AQ2QI47 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Ush2AQ2QI47 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ush2AQ2QI47 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC13.7□□□□□ -0.22
Ush2AQ2QI47 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms