Protein–RNA interactions for Protein: P50571

Gabrb1, Gamma-aminobutyric acid receptor subunit beta-1, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabrb1P50571 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Gabrb1P50571 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC21.58■■□□□ 1.04
Gabrb1P50571 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Gabrb1P50571 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.57■■□□□ 1.04
Gabrb1P50571 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Gabrb1P50571 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC21.57■■□□□ 1.04
Gabrb1P50571 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC21.56■■□□□ 1.04
Gabrb1P50571 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.55■■□□□ 1.04
Gabrb1P50571 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Gabrb1P50571 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Gabrb1P50571 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Gabrb1P50571 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.54■■□□□ 1.04
Gabrb1P50571 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Gabrb1P50571 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Gabrb1P50571 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Gabrb1P50571 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Gabrb1P50571 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Gabrb1P50571 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Gabrb1P50571 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Gabrb1P50571 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Gabrb1P50571 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Gabrb1P50571 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.49■■□□□ 1.03
Gabrb1P50571 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Gabrb1P50571 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Gabrb1P50571 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Gabrb1P50571 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Gabrb1P50571 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Gabrb1P50571 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Gabrb1P50571 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Gabrb1P50571 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Gabrb1P50571 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Gabrb1P50571 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Gabrb1P50571 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Gabrb1P50571 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Gabrb1P50571 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Gabrb1P50571 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Gabrb1P50571 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Gabrb1P50571 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Gabrb1P50571 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Gabrb1P50571 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Gabrb1P50571 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Gabrb1P50571 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Gabrb1P50571 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Gabrb1P50571 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Gabrb1P50571 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Gabrb1P50571 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Gabrb1P50571 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Gabrb1P50571 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Gabrb1P50571 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Gabrb1P50571 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.4■■□□□ 1.02
Gabrb1P50571 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
Gabrb1P50571 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Gabrb1P50571 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
Gabrb1P50571 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Gabrb1P50571 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Gabrb1P50571 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Gabrb1P50571 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Gabrb1P50571 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Gabrb1P50571 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Gabrb1P50571 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Gabrb1P50571 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Gabrb1P50571 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Gabrb1P50571 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Gabrb1P50571 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Gabrb1P50571 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
Gabrb1P50571 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Gabrb1P50571 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Gabrb1P50571 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Gabrb1P50571 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC21.31■■□□□ 1
Gabrb1P50571 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
Gabrb1P50571 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Gabrb1P50571 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Gabrb1P50571 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.3■■□□□ 1
Gabrb1P50571 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Gabrb1P50571 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.29■■□□□ 1
Gabrb1P50571 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Gabrb1P50571 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
Gabrb1P50571 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Gabrb1P50571 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC21.29■■□□□ 1
Gabrb1P50571 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Gabrb1P50571 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC21.28■■□□□ 1
Gabrb1P50571 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
Gabrb1P50571 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.27■■□□□ 1
Gabrb1P50571 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Gabrb1P50571 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Gabrb1P50571 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC21.27■■□□□ 1
Gabrb1P50571 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gabrb1P50571 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Gabrb1P50571 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gabrb1P50571 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Gabrb1P50571 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gabrb1P50571 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gabrb1P50571 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Gabrb1P50571 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gabrb1P50571 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gabrb1P50571 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC21.23■□□□□ 0.99
Gabrb1P50571 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gabrb1P50571 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.23■□□□□ 0.99
Gabrb1P50571 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gabrb1P50571 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 124.8 ms