Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
GdnfP48540 Gm30346-201ENSMUST00000218641 1699 ntBASIC21.02■□□□□ 0.96
GdnfP48540 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
GdnfP48540 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC21.01■□□□□ 0.95
GdnfP48540 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
GdnfP48540 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
GdnfP48540 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
GdnfP48540 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
GdnfP48540 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
GdnfP48540 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.99■□□□□ 0.95
GdnfP48540 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
GdnfP48540 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
GdnfP48540 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
GdnfP48540 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
GdnfP48540 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
GdnfP48540 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
GdnfP48540 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
GdnfP48540 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
GdnfP48540 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
GdnfP48540 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
GdnfP48540 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
GdnfP48540 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
GdnfP48540 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
GdnfP48540 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
GdnfP48540 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
GdnfP48540 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
GdnfP48540 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
GdnfP48540 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.91■□□□□ 0.94
GdnfP48540 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
GdnfP48540 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
GdnfP48540 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
GdnfP48540 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
GdnfP48540 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
GdnfP48540 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
GdnfP48540 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
GdnfP48540 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
GdnfP48540 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
GdnfP48540 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
GdnfP48540 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
GdnfP48540 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC20.88■□□□□ 0.93
GdnfP48540 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
GdnfP48540 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
GdnfP48540 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC20.87■□□□□ 0.93
GdnfP48540 Zfp131-205ENSMUST00000223812 663 ntBASIC20.87■□□□□ 0.93
GdnfP48540 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
GdnfP48540 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
GdnfP48540 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
GdnfP48540 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
GdnfP48540 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
GdnfP48540 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.85■□□□□ 0.93
GdnfP48540 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
GdnfP48540 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
GdnfP48540 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
GdnfP48540 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
GdnfP48540 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
GdnfP48540 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
GdnfP48540 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
GdnfP48540 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC20.84■□□□□ 0.93
GdnfP48540 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
GdnfP48540 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
GdnfP48540 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
GdnfP48540 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
GdnfP48540 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
GdnfP48540 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
GdnfP48540 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
GdnfP48540 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.92
GdnfP48540 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
GdnfP48540 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
GdnfP48540 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
GdnfP48540 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
GdnfP48540 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
GdnfP48540 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
GdnfP48540 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
GdnfP48540 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC20.78■□□□□ 0.92
GdnfP48540 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
GdnfP48540 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
GdnfP48540 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
GdnfP48540 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
GdnfP48540 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
GdnfP48540 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC20.77■□□□□ 0.92
GdnfP48540 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
GdnfP48540 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
GdnfP48540 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
GdnfP48540 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
GdnfP48540 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC20.75■□□□□ 0.91
GdnfP48540 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
GdnfP48540 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
GdnfP48540 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
GdnfP48540 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
GdnfP48540 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
GdnfP48540 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
GdnfP48540 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
GdnfP48540 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC20.73■□□□□ 0.91
GdnfP48540 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
GdnfP48540 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
GdnfP48540 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
GdnfP48540 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
GdnfP48540 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
GdnfP48540 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
GdnfP48540 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.7■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 105.7 ms