Protein–RNA interactions for Protein: P48030

Tgfa, Protransforming growth factor alpha, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TgfaP48030 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TgfaP48030 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC21.56■■□□□ 1.04
TgfaP48030 Gm11175-201ENSMUST00000116172 543 ntBASIC21.56■■□□□ 1.04
TgfaP48030 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TgfaP48030 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC21.55■■□□□ 1.04
TgfaP48030 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
TgfaP48030 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TgfaP48030 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC21.53■■□□□ 1.04
TgfaP48030 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.53■■□□□ 1.04
TgfaP48030 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC21.53■■□□□ 1.04
TgfaP48030 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TgfaP48030 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TgfaP48030 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
TgfaP48030 Gm2415-204ENSMUST00000190235 2004 ntBASIC21.5■■□□□ 1.03
TgfaP48030 AC131739.1-201ENSMUST00000221692 1245 ntBASIC21.48■■□□□ 1.03
TgfaP48030 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TgfaP48030 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TgfaP48030 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TgfaP48030 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TgfaP48030 Cap2-205ENSMUST00000225824 1634 ntBASIC21.46■■□□□ 1.03
TgfaP48030 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC21.46■■□□□ 1.03
TgfaP48030 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
TgfaP48030 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
TgfaP48030 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
TgfaP48030 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TgfaP48030 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TgfaP48030 Gm6311-201ENSMUST00000073790 878 ntBASIC21.43■■□□□ 1.02
TgfaP48030 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
TgfaP48030 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TgfaP48030 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TgfaP48030 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TgfaP48030 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TgfaP48030 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TgfaP48030 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
TgfaP48030 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TgfaP48030 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TgfaP48030 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC21.38■■□□□ 1.01
TgfaP48030 Gm6658-202ENSMUST00000209493 1885 ntBASIC21.37■■□□□ 1.01
TgfaP48030 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TgfaP48030 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TgfaP48030 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC21.35■■□□□ 1.01
TgfaP48030 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC21.35■■□□□ 1.01
TgfaP48030 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
TgfaP48030 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC21.35■■□□□ 1.01
TgfaP48030 AC167019.3-201ENSMUST00000228225 1266 ntBASIC21.35■■□□□ 1.01
TgfaP48030 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TgfaP48030 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TgfaP48030 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TgfaP48030 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TgfaP48030 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
TgfaP48030 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC21.33■■□□□ 1.01
TgfaP48030 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC21.32■■□□□ 1
TgfaP48030 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC21.32■■□□□ 1
TgfaP48030 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TgfaP48030 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TgfaP48030 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.31■■□□□ 1
TgfaP48030 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
TgfaP48030 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21.3■■□□□ 1
TgfaP48030 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
TgfaP48030 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC21.3■■□□□ 1
TgfaP48030 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TgfaP48030 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21.29■■□□□ 1
TgfaP48030 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC21.29■■□□□ 1
TgfaP48030 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC21.28■■□□□ 1
TgfaP48030 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
TgfaP48030 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
TgfaP48030 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TgfaP48030 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC21.25■□□□□ 0.99
TgfaP48030 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TgfaP48030 Gm6345-201ENSMUST00000180378 1691 ntBASIC21.24■□□□□ 0.99
TgfaP48030 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.24■□□□□ 0.99
TgfaP48030 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC21.24■□□□□ 0.99
TgfaP48030 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.24■□□□□ 0.99
TgfaP48030 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
TgfaP48030 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TgfaP48030 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
TgfaP48030 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC21.23■□□□□ 0.99
TgfaP48030 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TgfaP48030 Particl-201ENSMUST00000205370 1560 ntBASIC21.23■□□□□ 0.99
TgfaP48030 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TgfaP48030 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC21.22■□□□□ 0.99
TgfaP48030 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TgfaP48030 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
TgfaP48030 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
TgfaP48030 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TgfaP48030 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC21.2■□□□□ 0.98
TgfaP48030 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TgfaP48030 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
TgfaP48030 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
TgfaP48030 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TgfaP48030 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TgfaP48030 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
TgfaP48030 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
TgfaP48030 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TgfaP48030 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TgfaP48030 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TgfaP48030 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TgfaP48030 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
TgfaP48030 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TgfaP48030 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms