Protein–RNA interactions for Protein: P0C1T1

Hoxb2, Homeobox protein Hox-B2, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb2P0C1T1 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Hoxb2P0C1T1 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21.34■■□□□ 1.01
Hoxb2P0C1T1 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Hoxb2P0C1T1 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC21.33■■□□□ 1.01
Hoxb2P0C1T1 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Hoxb2P0C1T1 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC21.32■■□□□ 1
Hoxb2P0C1T1 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC21.32■■□□□ 1
Hoxb2P0C1T1 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Hoxb2P0C1T1 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Hoxb2P0C1T1 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Hoxb2P0C1T1 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC21.3■■□□□ 1
Hoxb2P0C1T1 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Hoxb2P0C1T1 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC21.29■■□□□ 1
Hoxb2P0C1T1 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC21.29■■□□□ 1
Hoxb2P0C1T1 Nkain2-201ENSMUST00000092602 558 ntBASIC21.29■■□□□ 1
Hoxb2P0C1T1 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Hoxb2P0C1T1 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC21.28■■□□□ 1
Hoxb2P0C1T1 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
Hoxb2P0C1T1 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Hoxb2P0C1T1 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Hoxb2P0C1T1 Zxda-201ENSMUST00000117281 2621 ntBASIC21.26■□□□□ 0.99
Hoxb2P0C1T1 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Hoxb2P0C1T1 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Hoxb2P0C1T1 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC21.25■□□□□ 0.99
Hoxb2P0C1T1 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Hoxb2P0C1T1 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Hoxb2P0C1T1 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Hoxb2P0C1T1 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Hoxb2P0C1T1 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Hoxb2P0C1T1 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Hoxb2P0C1T1 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hoxb2P0C1T1 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hoxb2P0C1T1 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hoxb2P0C1T1 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hoxb2P0C1T1 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Hoxb2P0C1T1 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Hoxb2P0C1T1 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Hoxb2P0C1T1 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Hoxb2P0C1T1 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hoxb2P0C1T1 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hoxb2P0C1T1 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC21.19■□□□□ 0.98
Hoxb2P0C1T1 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Hoxb2P0C1T1 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Hoxb2P0C1T1 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC21.18■□□□□ 0.98
Hoxb2P0C1T1 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC21.18■□□□□ 0.98
Hoxb2P0C1T1 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Hoxb2P0C1T1 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Hoxb2P0C1T1 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC21.17■□□□□ 0.98
Hoxb2P0C1T1 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC21.17■□□□□ 0.98
Hoxb2P0C1T1 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Hoxb2P0C1T1 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Hoxb2P0C1T1 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC21.15■□□□□ 0.98
Hoxb2P0C1T1 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Hoxb2P0C1T1 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Hoxb2P0C1T1 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Hoxb2P0C1T1 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC21.15■□□□□ 0.98
Hoxb2P0C1T1 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Hoxb2P0C1T1 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Hoxb2P0C1T1 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Hoxb2P0C1T1 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Hoxb2P0C1T1 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC21.13■□□□□ 0.97
Hoxb2P0C1T1 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hoxb2P0C1T1 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Hoxb2P0C1T1 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Hoxb2P0C1T1 Gm43445-201ENSMUST00000198564 2091 ntBASIC21.11■□□□□ 0.97
Hoxb2P0C1T1 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Hoxb2P0C1T1 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Hoxb2P0C1T1 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Hoxb2P0C1T1 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Hoxb2P0C1T1 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Hoxb2P0C1T1 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Hoxb2P0C1T1 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Hoxb2P0C1T1 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC21.08■□□□□ 0.96
Hoxb2P0C1T1 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Hoxb2P0C1T1 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Hoxb2P0C1T1 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Hoxb2P0C1T1 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Hoxb2P0C1T1 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Hoxb2P0C1T1 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Hoxb2P0C1T1 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Hoxb2P0C1T1 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC21.03■□□□□ 0.96
Hoxb2P0C1T1 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC21.03■□□□□ 0.96
Hoxb2P0C1T1 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC21.03■□□□□ 0.96
Hoxb2P0C1T1 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Hoxb2P0C1T1 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Hoxb2P0C1T1 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Hoxb2P0C1T1 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC21.02■□□□□ 0.96
Hoxb2P0C1T1 Gm6206-201ENSMUST00000133472 2199 ntBASIC21.02■□□□□ 0.96
Hoxb2P0C1T1 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.02■□□□□ 0.96
Hoxb2P0C1T1 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Hoxb2P0C1T1 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
Hoxb2P0C1T1 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Hoxb2P0C1T1 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Hoxb2P0C1T1 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hoxb2P0C1T1 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC21■□□□□ 0.95
Hoxb2P0C1T1 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC21■□□□□ 0.95
Hoxb2P0C1T1 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.99■□□□□ 0.95
Hoxb2P0C1T1 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Hoxb2P0C1T1 Gm30023-201ENSMUST00000197970 889 ntBASIC20.99■□□□□ 0.95
Hoxb2P0C1T1 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC20.99■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms