Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TcraP01849 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TcraP01849 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC17.51■□□□□ 0.39
TcraP01849 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TcraP01849 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TcraP01849 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TcraP01849 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
TcraP01849 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
TcraP01849 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
TcraP01849 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TcraP01849 Gm27322-201ENSMUST00000184007 104 ntBASIC17.48■□□□□ 0.39
TcraP01849 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TcraP01849 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TcraP01849 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
TcraP01849 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TcraP01849 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TcraP01849 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TcraP01849 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
TcraP01849 Gm17082-201ENSMUST00000166043 1091 ntBASIC17.46■□□□□ 0.39
TcraP01849 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TcraP01849 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TcraP01849 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
TcraP01849 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TcraP01849 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TcraP01849 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TcraP01849 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TcraP01849 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
TcraP01849 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TcraP01849 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TcraP01849 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TcraP01849 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TcraP01849 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC17.41■□□□□ 0.38
TcraP01849 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TcraP01849 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TcraP01849 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TcraP01849 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TcraP01849 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TcraP01849 AC166822.3-201ENSMUST00000227394 661 ntBASIC17.4■□□□□ 0.38
TcraP01849 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
TcraP01849 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TcraP01849 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
TcraP01849 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TcraP01849 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TcraP01849 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
TcraP01849 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TcraP01849 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TcraP01849 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TcraP01849 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC17.37■□□□□ 0.37
TcraP01849 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TcraP01849 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC17.36■□□□□ 0.37
TcraP01849 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC17.36■□□□□ 0.37
TcraP01849 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TcraP01849 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC17.35■□□□□ 0.37
TcraP01849 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
TcraP01849 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TcraP01849 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TcraP01849 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
TcraP01849 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TcraP01849 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC17.34■□□□□ 0.37
TcraP01849 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TcraP01849 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
TcraP01849 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TcraP01849 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TcraP01849 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC17.33■□□□□ 0.36
TcraP01849 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TcraP01849 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
TcraP01849 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TcraP01849 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TcraP01849 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC17.31■□□□□ 0.36
TcraP01849 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TcraP01849 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC17.3■□□□□ 0.36
TcraP01849 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
TcraP01849 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TcraP01849 Gm26115-201ENSMUST00000175605 87 ntBASIC17.3■□□□□ 0.36
TcraP01849 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TcraP01849 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
TcraP01849 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
TcraP01849 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TcraP01849 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TcraP01849 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TcraP01849 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TcraP01849 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
TcraP01849 Gm30346-201ENSMUST00000218641 1699 ntBASIC17.29■□□□□ 0.36
TcraP01849 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TcraP01849 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC17.28■□□□□ 0.36
TcraP01849 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC17.27■□□□□ 0.36
TcraP01849 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TcraP01849 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TcraP01849 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TcraP01849 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TcraP01849 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TcraP01849 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TcraP01849 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TcraP01849 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TcraP01849 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TcraP01849 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TcraP01849 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TcraP01849 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TcraP01849 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
TcraP01849 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms