Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Cldn1O88551 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.8■□□□□ 0.92
Cldn1O88551 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cldn1O88551 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.79■□□□□ 0.92
Cldn1O88551 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cldn1O88551 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC20.79■□□□□ 0.92
Cldn1O88551 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.79■□□□□ 0.92
Cldn1O88551 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC20.79■□□□□ 0.92
Cldn1O88551 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cldn1O88551 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Cldn1O88551 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.78■□□□□ 0.92
Cldn1O88551 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cldn1O88551 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Cldn1O88551 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.76■□□□□ 0.91
Cldn1O88551 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cldn1O88551 Gm30346-201ENSMUST00000218641 1699 ntBASIC20.74■□□□□ 0.91
Cldn1O88551 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Cldn1O88551 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cldn1O88551 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20.72■□□□□ 0.91
Cldn1O88551 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cldn1O88551 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC20.7■□□□□ 0.9
Cldn1O88551 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cldn1O88551 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Cldn1O88551 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cldn1O88551 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cldn1O88551 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Cldn1O88551 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Cldn1O88551 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.68■□□□□ 0.9
Cldn1O88551 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Cldn1O88551 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cldn1O88551 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.67■□□□□ 0.9
Cldn1O88551 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Cldn1O88551 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC20.67■□□□□ 0.9
Cldn1O88551 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Cldn1O88551 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cldn1O88551 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cldn1O88551 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cldn1O88551 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cldn1O88551 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.66■□□□□ 0.9
Cldn1O88551 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cldn1O88551 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cldn1O88551 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Cldn1O88551 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cldn1O88551 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Cldn1O88551 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cldn1O88551 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Cldn1O88551 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cldn1O88551 Gm6311-201ENSMUST00000073790 878 ntBASIC20.63■□□□□ 0.89
Cldn1O88551 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cldn1O88551 Zxda-201ENSMUST00000117281 2621 ntBASIC20.62■□□□□ 0.89
Cldn1O88551 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Cldn1O88551 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cldn1O88551 Gm2415-204ENSMUST00000190235 2004 ntBASIC20.61■□□□□ 0.89
Cldn1O88551 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.6■□□□□ 0.89
Cldn1O88551 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cldn1O88551 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cldn1O88551 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Cldn1O88551 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.6■□□□□ 0.89
Cldn1O88551 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Cldn1O88551 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cldn1O88551 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Cldn1O88551 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Cldn1O88551 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cldn1O88551 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cldn1O88551 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cldn1O88551 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cldn1O88551 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.56■□□□□ 0.88
Cldn1O88551 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cldn1O88551 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Cldn1O88551 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cldn1O88551 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cldn1O88551 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC20.53■□□□□ 0.88
Cldn1O88551 AC167019.3-201ENSMUST00000228225 1266 ntBASIC20.53■□□□□ 0.88
Cldn1O88551 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cldn1O88551 Gm6658-202ENSMUST00000209493 1885 ntBASIC20.52■□□□□ 0.88
Cldn1O88551 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20.52■□□□□ 0.88
Cldn1O88551 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20.52■□□□□ 0.88
Cldn1O88551 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cldn1O88551 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cldn1O88551 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cldn1O88551 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cldn1O88551 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cldn1O88551 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20.5■□□□□ 0.87
Cldn1O88551 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cldn1O88551 Gm6345-201ENSMUST00000180378 1691 ntBASIC20.5■□□□□ 0.87
Cldn1O88551 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cldn1O88551 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Cldn1O88551 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Cldn1O88551 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.48■□□□□ 0.87
Cldn1O88551 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.48■□□□□ 0.87
Cldn1O88551 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Cldn1O88551 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.47■□□□□ 0.87
Cldn1O88551 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.47■□□□□ 0.87
Cldn1O88551 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC20.46■□□□□ 0.87
Cldn1O88551 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cldn1O88551 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Cldn1O88551 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cldn1O88551 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
Cldn1O88551 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC20.43■□□□□ 0.86
Cldn1O88551 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 884.1 ms