Protein–RNA interactions for Protein: G5E8X0

Cldn20, Claudin, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn20G5E8X0 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Cldn20G5E8X0 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Cldn20G5E8X0 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cldn20G5E8X0 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Cldn20G5E8X0 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cldn20G5E8X0 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cldn20G5E8X0 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Cldn20G5E8X0 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Cldn20G5E8X0 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cldn20G5E8X0 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cldn20G5E8X0 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cldn20G5E8X0 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cldn20G5E8X0 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cldn20G5E8X0 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cldn20G5E8X0 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Cldn20G5E8X0 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Cldn20G5E8X0 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
Cldn20G5E8X0 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Cldn20G5E8X0 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cldn20G5E8X0 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cldn20G5E8X0 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Cldn20G5E8X0 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cldn20G5E8X0 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cldn20G5E8X0 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Cldn20G5E8X0 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Cldn20G5E8X0 Gm16148-201ENSMUST00000119653 893 ntBASIC20.87■□□□□ 0.93
Cldn20G5E8X0 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Cldn20G5E8X0 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC20.87■□□□□ 0.93
Cldn20G5E8X0 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cldn20G5E8X0 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cldn20G5E8X0 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Cldn20G5E8X0 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC20.85■□□□□ 0.93
Cldn20G5E8X0 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cldn20G5E8X0 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cldn20G5E8X0 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cldn20G5E8X0 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cldn20G5E8X0 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
Cldn20G5E8X0 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
Cldn20G5E8X0 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cldn20G5E8X0 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Cldn20G5E8X0 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20.81■□□□□ 0.92
Cldn20G5E8X0 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cldn20G5E8X0 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cldn20G5E8X0 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Cldn20G5E8X0 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Cldn20G5E8X0 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Cldn20G5E8X0 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cldn20G5E8X0 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cldn20G5E8X0 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Cldn20G5E8X0 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
Cldn20G5E8X0 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cldn20G5E8X0 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC20.78■□□□□ 0.92
Cldn20G5E8X0 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cldn20G5E8X0 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cldn20G5E8X0 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cldn20G5E8X0 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Cldn20G5E8X0 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Cldn20G5E8X0 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Cldn20G5E8X0 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Cldn20G5E8X0 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cldn20G5E8X0 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC20.76■□□□□ 0.91
Cldn20G5E8X0 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Cldn20G5E8X0 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Cldn20G5E8X0 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cldn20G5E8X0 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Cldn20G5E8X0 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cldn20G5E8X0 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cldn20G5E8X0 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Cldn20G5E8X0 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC20.73■□□□□ 0.91
Cldn20G5E8X0 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cldn20G5E8X0 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cldn20G5E8X0 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Cldn20G5E8X0 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Cldn20G5E8X0 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cldn20G5E8X0 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cldn20G5E8X0 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cldn20G5E8X0 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cldn20G5E8X0 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC20.72■□□□□ 0.91
Cldn20G5E8X0 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cldn20G5E8X0 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Cldn20G5E8X0 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cldn20G5E8X0 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cldn20G5E8X0 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Cldn20G5E8X0 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cldn20G5E8X0 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.71■□□□□ 0.91
Cldn20G5E8X0 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cldn20G5E8X0 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Cldn20G5E8X0 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cldn20G5E8X0 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cldn20G5E8X0 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cldn20G5E8X0 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cldn20G5E8X0 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cldn20G5E8X0 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cldn20G5E8X0 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cldn20G5E8X0 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Cldn20G5E8X0 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cldn20G5E8X0 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
Cldn20G5E8X0 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cldn20G5E8X0 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC20.66■□□□□ 0.9
Cldn20G5E8X0 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 109.3 ms