Protein–RNA interactions for Protein: E9Q6B2

Ccdc85c, Coiled-coil domain-containing protein 85C, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85cE9Q6B2 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Ccdc85cE9Q6B2 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC31.4■■■□□ 2.62
Ccdc85cE9Q6B2 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC31.4■■■□□ 2.62
Ccdc85cE9Q6B2 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC31.39■■■□□ 2.62
Ccdc85cE9Q6B2 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC31.39■■■□□ 2.62
Ccdc85cE9Q6B2 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC31.39■■■□□ 2.62
Ccdc85cE9Q6B2 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.61
Ccdc85cE9Q6B2 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Ccdc85cE9Q6B2 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Ccdc85cE9Q6B2 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC31.37■■■□□ 2.61
Ccdc85cE9Q6B2 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC31.36■■■□□ 2.61
Ccdc85cE9Q6B2 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC31.35■■■□□ 2.61
Ccdc85cE9Q6B2 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC31.34■■■□□ 2.61
Ccdc85cE9Q6B2 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Ccdc85cE9Q6B2 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC31.33■■■□□ 2.61
Ccdc85cE9Q6B2 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
Ccdc85cE9Q6B2 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC31.33■■■□□ 2.61
Ccdc85cE9Q6B2 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC31.32■■■□□ 2.6
Ccdc85cE9Q6B2 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
Ccdc85cE9Q6B2 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Ccdc85cE9Q6B2 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC31.31■■■□□ 2.6
Ccdc85cE9Q6B2 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC31.31■■■□□ 2.6
Ccdc85cE9Q6B2 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC31.3■■■□□ 2.6
Ccdc85cE9Q6B2 Gm12366-201ENSMUST00000121722 873 ntBASIC31.3■■■□□ 2.6
Ccdc85cE9Q6B2 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC31.3■■■□□ 2.6
Ccdc85cE9Q6B2 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Ccdc85cE9Q6B2 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC31.3■■■□□ 2.6
Ccdc85cE9Q6B2 Gm5786-201ENSMUST00000085368 882 ntBASIC31.3■■■□□ 2.6
Ccdc85cE9Q6B2 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC31.29■■■□□ 2.6
Ccdc85cE9Q6B2 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Ccdc85cE9Q6B2 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC31.27■■■□□ 2.6
Ccdc85cE9Q6B2 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
Ccdc85cE9Q6B2 Gm6345-201ENSMUST00000180378 1691 ntBASIC31.27■■■□□ 2.6
Ccdc85cE9Q6B2 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
Ccdc85cE9Q6B2 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
Ccdc85cE9Q6B2 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Ccdc85cE9Q6B2 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC31.25■■■□□ 2.59
Ccdc85cE9Q6B2 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
Ccdc85cE9Q6B2 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
Ccdc85cE9Q6B2 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC31.23■■■□□ 2.59
Ccdc85cE9Q6B2 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC31.23■■■□□ 2.59
Ccdc85cE9Q6B2 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
Ccdc85cE9Q6B2 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC31.21■■■□□ 2.59
Ccdc85cE9Q6B2 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Ccdc85cE9Q6B2 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
Ccdc85cE9Q6B2 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Ccdc85cE9Q6B2 Scarna2-201ENSMUST00000157560 414 ntBASIC31.18■■■□□ 2.58
Ccdc85cE9Q6B2 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC31.18■■■□□ 2.58
Ccdc85cE9Q6B2 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Ccdc85cE9Q6B2 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Ccdc85cE9Q6B2 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Ccdc85cE9Q6B2 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Ccdc85cE9Q6B2 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC31.14■■■□□ 2.58
Ccdc85cE9Q6B2 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Ccdc85cE9Q6B2 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Ccdc85cE9Q6B2 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Ccdc85cE9Q6B2 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Ccdc85cE9Q6B2 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC31.12■■■□□ 2.57
Ccdc85cE9Q6B2 Gm22567-201ENSMUST00000175542 342 ntBASIC31.12■■■□□ 2.57
Ccdc85cE9Q6B2 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
Ccdc85cE9Q6B2 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
Ccdc85cE9Q6B2 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
Ccdc85cE9Q6B2 Gm11687-201ENSMUST00000118911 886 ntBASIC31.1■■■□□ 2.57
Ccdc85cE9Q6B2 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Ccdc85cE9Q6B2 Gm4799-201ENSMUST00000095396 657 ntBASIC31.08■■■□□ 2.57
Ccdc85cE9Q6B2 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC31.06■■■□□ 2.56
Ccdc85cE9Q6B2 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC31.06■■■□□ 2.56
Ccdc85cE9Q6B2 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Ccdc85cE9Q6B2 Gm30346-201ENSMUST00000218641 1699 ntBASIC31.05■■■□□ 2.56
Ccdc85cE9Q6B2 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
Ccdc85cE9Q6B2 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC31.04■■■□□ 2.56
Ccdc85cE9Q6B2 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Ccdc85cE9Q6B2 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Ccdc85cE9Q6B2 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC31.03■■■□□ 2.56
Ccdc85cE9Q6B2 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC31.03■■■□□ 2.56
Ccdc85cE9Q6B2 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
Ccdc85cE9Q6B2 Gm9806-201ENSMUST00000051080 552 ntBASIC31.02■■■□□ 2.56
Ccdc85cE9Q6B2 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
Ccdc85cE9Q6B2 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC31.02■■■□□ 2.56
Ccdc85cE9Q6B2 Gm16437-201ENSMUST00000025669 507 ntBASIC31■■■□□ 2.55
Ccdc85cE9Q6B2 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC31■■■□□ 2.55
Ccdc85cE9Q6B2 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
Ccdc85cE9Q6B2 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
Ccdc85cE9Q6B2 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
Ccdc85cE9Q6B2 Gm7332-201ENSMUST00000118351 454 ntBASIC30.98■■■□□ 2.55
Ccdc85cE9Q6B2 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC30.97■■■□□ 2.55
Ccdc85cE9Q6B2 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Ccdc85cE9Q6B2 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
Ccdc85cE9Q6B2 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Ccdc85cE9Q6B2 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
Ccdc85cE9Q6B2 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC30.95■■■□□ 2.55
Ccdc85cE9Q6B2 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
Ccdc85cE9Q6B2 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC30.94■■■□□ 2.54
Ccdc85cE9Q6B2 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
Ccdc85cE9Q6B2 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC30.92■■■□□ 2.54
Ccdc85cE9Q6B2 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Ccdc85cE9Q6B2 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC30.91■■■□□ 2.54
Ccdc85cE9Q6B2 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Ccdc85cE9Q6B2 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Ccdc85cE9Q6B2 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC30.9■■■□□ 2.54
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms