Protein–RNA interactions for Protein: A0A140T8M3

Igkv8-30, Immunoglobulin kappa chain variable 8-30 (Fragment), mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-30A0A140T8M3 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
Igkv8-30A0A140T8M3 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Igkv8-30A0A140T8M3 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC15.32■□□□□ 0.04
Igkv8-30A0A140T8M3 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Igkv8-30A0A140T8M3 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Igkv8-30A0A140T8M3 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Igkv8-30A0A140T8M3 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Igkv8-30A0A140T8M3 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Igkv8-30A0A140T8M3 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Igkv8-30A0A140T8M3 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Igkv8-30A0A140T8M3 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Igkv8-30A0A140T8M3 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Igkv8-30A0A140T8M3 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Igkv8-30A0A140T8M3 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Igkv8-30A0A140T8M3 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Igkv8-30A0A140T8M3 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Igkv8-30A0A140T8M3 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Igkv8-30A0A140T8M3 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Igkv8-30A0A140T8M3 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Igkv8-30A0A140T8M3 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Igkv8-30A0A140T8M3 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Igkv8-30A0A140T8M3 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Igkv8-30A0A140T8M3 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Igkv8-30A0A140T8M3 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Igkv8-30A0A140T8M3 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Igkv8-30A0A140T8M3 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Igkv8-30A0A140T8M3 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Igkv8-30A0A140T8M3 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Igkv8-30A0A140T8M3 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Igkv8-30A0A140T8M3 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Igkv8-30A0A140T8M3 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Igkv8-30A0A140T8M3 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC15.26■□□□□ 0.03
Igkv8-30A0A140T8M3 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Igkv8-30A0A140T8M3 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Igkv8-30A0A140T8M3 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC15.25■□□□□ 0.03
Igkv8-30A0A140T8M3 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
Igkv8-30A0A140T8M3 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Igkv8-30A0A140T8M3 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Igkv8-30A0A140T8M3 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Igkv8-30A0A140T8M3 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Igkv8-30A0A140T8M3 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Igkv8-30A0A140T8M3 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Igkv8-30A0A140T8M3 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Igkv8-30A0A140T8M3 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Igkv8-30A0A140T8M3 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
Igkv8-30A0A140T8M3 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Igkv8-30A0A140T8M3 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Igkv8-30A0A140T8M3 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Igkv8-30A0A140T8M3 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Igkv8-30A0A140T8M3 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Igkv8-30A0A140T8M3 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Igkv8-30A0A140T8M3 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Igkv8-30A0A140T8M3 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Igkv8-30A0A140T8M3 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Igkv8-30A0A140T8M3 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Igkv8-30A0A140T8M3 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Igkv8-30A0A140T8M3 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Igkv8-30A0A140T8M3 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Igkv8-30A0A140T8M3 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Igkv8-30A0A140T8M3 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Igkv8-30A0A140T8M3 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC15.2■□□□□ 0.02
Igkv8-30A0A140T8M3 AL845457.1-201ENSMUST00000197244 68 ntBASIC15.2■□□□□ 0.02
Igkv8-30A0A140T8M3 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Igkv8-30A0A140T8M3 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Igkv8-30A0A140T8M3 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Igkv8-30A0A140T8M3 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC15.2■□□□□ 0.02
Igkv8-30A0A140T8M3 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Igkv8-30A0A140T8M3 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Igkv8-30A0A140T8M3 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC15.19■□□□□ 0.02
Igkv8-30A0A140T8M3 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Igkv8-30A0A140T8M3 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Igkv8-30A0A140T8M3 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Igkv8-30A0A140T8M3 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Igkv8-30A0A140T8M3 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Igkv8-30A0A140T8M3 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Igkv8-30A0A140T8M3 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Igkv8-30A0A140T8M3 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Igkv8-30A0A140T8M3 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Igkv8-30A0A140T8M3 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Igkv8-30A0A140T8M3 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Igkv8-30A0A140T8M3 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Igkv8-30A0A140T8M3 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Igkv8-30A0A140T8M3 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Igkv8-30A0A140T8M3 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Igkv8-30A0A140T8M3 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
Igkv8-30A0A140T8M3 Rab21-202ENSMUST00000218831 843 ntBASIC15.16■□□□□ 0.02
Igkv8-30A0A140T8M3 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Igkv8-30A0A140T8M3 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Igkv8-30A0A140T8M3 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Igkv8-30A0A140T8M3 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Igkv8-30A0A140T8M3 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Igkv8-30A0A140T8M3 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Igkv8-30A0A140T8M3 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Igkv8-30A0A140T8M3 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Igkv8-30A0A140T8M3 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Igkv8-30A0A140T8M3 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Igkv8-30A0A140T8M3 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Igkv8-30A0A140T8M3 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC15.13■□□□□ 0.01
Igkv8-30A0A140T8M3 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Igkv8-30A0A140T8M3 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms