Protein–RNA interactions for Protein: A0A0G2JF93

Trav13n-2, T cell receptor alpha variable 13D-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-2A0A0G2JF93 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC15.93■□□□□ 0.14
Trav13n-2A0A0G2JF93 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Trav13n-2A0A0G2JF93 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Trav13n-2A0A0G2JF93 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trav13n-2A0A0G2JF93 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav13n-2A0A0G2JF93 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav13n-2A0A0G2JF93 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav13n-2A0A0G2JF93 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trav13n-2A0A0G2JF93 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav13n-2A0A0G2JF93 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav13n-2A0A0G2JF93 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav13n-2A0A0G2JF93 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav13n-2A0A0G2JF93 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav13n-2A0A0G2JF93 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav13n-2A0A0G2JF93 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC15.89■□□□□ 0.13
Trav13n-2A0A0G2JF93 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Trav13n-2A0A0G2JF93 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav13n-2A0A0G2JF93 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav13n-2A0A0G2JF93 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC15.88■□□□□ 0.13
Trav13n-2A0A0G2JF93 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav13n-2A0A0G2JF93 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav13n-2A0A0G2JF93 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav13n-2A0A0G2JF93 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC15.87■□□□□ 0.13
Trav13n-2A0A0G2JF93 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav13n-2A0A0G2JF93 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Trav13n-2A0A0G2JF93 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
Trav13n-2A0A0G2JF93 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav13n-2A0A0G2JF93 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
Trav13n-2A0A0G2JF93 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Trav13n-2A0A0G2JF93 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav13n-2A0A0G2JF93 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav13n-2A0A0G2JF93 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav13n-2A0A0G2JF93 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav13n-2A0A0G2JF93 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav13n-2A0A0G2JF93 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trav13n-2A0A0G2JF93 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC15.85■□□□□ 0.13
Trav13n-2A0A0G2JF93 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav13n-2A0A0G2JF93 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trav13n-2A0A0G2JF93 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trav13n-2A0A0G2JF93 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trav13n-2A0A0G2JF93 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trav13n-2A0A0G2JF93 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav13n-2A0A0G2JF93 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav13n-2A0A0G2JF93 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC15.82■□□□□ 0.12
Trav13n-2A0A0G2JF93 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav13n-2A0A0G2JF93 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC15.82■□□□□ 0.12
Trav13n-2A0A0G2JF93 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav13n-2A0A0G2JF93 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav13n-2A0A0G2JF93 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav13n-2A0A0G2JF93 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
Trav13n-2A0A0G2JF93 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC15.8■□□□□ 0.12
Trav13n-2A0A0G2JF93 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC15.8■□□□□ 0.12
Trav13n-2A0A0G2JF93 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav13n-2A0A0G2JF93 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Trav13n-2A0A0G2JF93 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC15.8■□□□□ 0.12
Trav13n-2A0A0G2JF93 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav13n-2A0A0G2JF93 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Trav13n-2A0A0G2JF93 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC15.8■□□□□ 0.12
Trav13n-2A0A0G2JF93 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC15.8■□□□□ 0.12
Trav13n-2A0A0G2JF93 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Trav13n-2A0A0G2JF93 Gm30346-201ENSMUST00000218641 1699 ntBASIC15.79■□□□□ 0.12
Trav13n-2A0A0G2JF93 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav13n-2A0A0G2JF93 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Trav13n-2A0A0G2JF93 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC15.79■□□□□ 0.12
Trav13n-2A0A0G2JF93 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC15.78■□□□□ 0.12
Trav13n-2A0A0G2JF93 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav13n-2A0A0G2JF93 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav13n-2A0A0G2JF93 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Trav13n-2A0A0G2JF93 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav13n-2A0A0G2JF93 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.12
Trav13n-2A0A0G2JF93 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Trav13n-2A0A0G2JF93 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Trav13n-2A0A0G2JF93 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav13n-2A0A0G2JF93 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav13n-2A0A0G2JF93 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav13n-2A0A0G2JF93 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Trav13n-2A0A0G2JF93 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav13n-2A0A0G2JF93 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Trav13n-2A0A0G2JF93 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav13n-2A0A0G2JF93 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav13n-2A0A0G2JF93 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trav13n-2A0A0G2JF93 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav13n-2A0A0G2JF93 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav13n-2A0A0G2JF93 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav13n-2A0A0G2JF93 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav13n-2A0A0G2JF93 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Trav13n-2A0A0G2JF93 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav13n-2A0A0G2JF93 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav13n-2A0A0G2JF93 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trav13n-2A0A0G2JF93 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav13n-2A0A0G2JF93 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav13n-2A0A0G2JF93 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trav13n-2A0A0G2JF93 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav13n-2A0A0G2JF93 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav13n-2A0A0G2JF93 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav13n-2A0A0G2JF93 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav13n-2A0A0G2JF93 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav13n-2A0A0G2JF93 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav13n-2A0A0G2JF93 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav13n-2A0A0G2JF93 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms