Protein–RNA interactions for Protein: A0A0G2JE47

Igkv8-28, Immunoglobulin kappa variable 8-28 (Fragment), mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-28A0A0G2JE47 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Igkv8-28A0A0G2JE47 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Igkv8-28A0A0G2JE47 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Igkv8-28A0A0G2JE47 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Igkv8-28A0A0G2JE47 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Igkv8-28A0A0G2JE47 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Igkv8-28A0A0G2JE47 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Igkv8-28A0A0G2JE47 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC15.09■□□□□ 0.01
Igkv8-28A0A0G2JE47 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Igkv8-28A0A0G2JE47 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0.01
Igkv8-28A0A0G2JE47 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Igkv8-28A0A0G2JE47 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC15.08■□□□□ 0
Igkv8-28A0A0G2JE47 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Igkv8-28A0A0G2JE47 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Igkv8-28A0A0G2JE47 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Igkv8-28A0A0G2JE47 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Igkv8-28A0A0G2JE47 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Igkv8-28A0A0G2JE47 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Igkv8-28A0A0G2JE47 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Igkv8-28A0A0G2JE47 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC15.06■□□□□ 0
Igkv8-28A0A0G2JE47 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Igkv8-28A0A0G2JE47 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Igkv8-28A0A0G2JE47 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Igkv8-28A0A0G2JE47 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Igkv8-28A0A0G2JE47 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC15.05■□□□□ 0
Igkv8-28A0A0G2JE47 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Igkv8-28A0A0G2JE47 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC15.05■□□□□ -0
Igkv8-28A0A0G2JE47 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Igkv8-28A0A0G2JE47 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC15.05■□□□□ -0
Igkv8-28A0A0G2JE47 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC15.05■□□□□ -0
Igkv8-28A0A0G2JE47 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Igkv8-28A0A0G2JE47 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Igkv8-28A0A0G2JE47 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
Igkv8-28A0A0G2JE47 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Igkv8-28A0A0G2JE47 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC15.03■□□□□ -0
Igkv8-28A0A0G2JE47 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Igkv8-28A0A0G2JE47 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Igkv8-28A0A0G2JE47 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Igkv8-28A0A0G2JE47 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Igkv8-28A0A0G2JE47 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Igkv8-28A0A0G2JE47 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC15.01□□□□□ -0.01
Igkv8-28A0A0G2JE47 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Igkv8-28A0A0G2JE47 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Igkv8-28A0A0G2JE47 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Igkv8-28A0A0G2JE47 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Igkv8-28A0A0G2JE47 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC15□□□□□ -0.01
Igkv8-28A0A0G2JE47 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC14.99□□□□□ -0.01
Igkv8-28A0A0G2JE47 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Igkv8-28A0A0G2JE47 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Igkv8-28A0A0G2JE47 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Igkv8-28A0A0G2JE47 Gm30346-201ENSMUST00000218641 1699 ntBASIC14.98□□□□□ -0.01
Igkv8-28A0A0G2JE47 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Igkv8-28A0A0G2JE47 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Igkv8-28A0A0G2JE47 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Igkv8-28A0A0G2JE47 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Igkv8-28A0A0G2JE47 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Igkv8-28A0A0G2JE47 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Igkv8-28A0A0G2JE47 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Igkv8-28A0A0G2JE47 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Igkv8-28A0A0G2JE47 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Igkv8-28A0A0G2JE47 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Igkv8-28A0A0G2JE47 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC14.96□□□□□ -0.01
Igkv8-28A0A0G2JE47 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Igkv8-28A0A0G2JE47 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Igkv8-28A0A0G2JE47 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Igkv8-28A0A0G2JE47 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Igkv8-28A0A0G2JE47 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Igkv8-28A0A0G2JE47 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Igkv8-28A0A0G2JE47 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Igkv8-28A0A0G2JE47 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Igkv8-28A0A0G2JE47 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Igkv8-28A0A0G2JE47 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC14.94□□□□□ -0.02
Igkv8-28A0A0G2JE47 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Igkv8-28A0A0G2JE47 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Igkv8-28A0A0G2JE47 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Igkv8-28A0A0G2JE47 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Igkv8-28A0A0G2JE47 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC14.93□□□□□ -0.02
Igkv8-28A0A0G2JE47 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Igkv8-28A0A0G2JE47 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Igkv8-28A0A0G2JE47 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Igkv8-28A0A0G2JE47 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Igkv8-28A0A0G2JE47 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Igkv8-28A0A0G2JE47 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Igkv8-28A0A0G2JE47 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Igkv8-28A0A0G2JE47 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Igkv8-28A0A0G2JE47 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Igkv8-28A0A0G2JE47 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC14.92□□□□□ -0.02
Igkv8-28A0A0G2JE47 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Igkv8-28A0A0G2JE47 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Igkv8-28A0A0G2JE47 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Igkv8-28A0A0G2JE47 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Igkv8-28A0A0G2JE47 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Igkv8-28A0A0G2JE47 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Igkv8-28A0A0G2JE47 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Igkv8-28A0A0G2JE47 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Igkv8-28A0A0G2JE47 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Igkv8-28A0A0G2JE47 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Igkv8-28A0A0G2JE47 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC14.89□□□□□ -0.03
Igkv8-28A0A0G2JE47 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Igkv8-28A0A0G2JE47 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms