Protein–RNA interactions for Protein: A0A0B4J1P1

Trbv30, T cell receptor beta, variable 30 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv30A0A0B4J1P1 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trbv30A0A0B4J1P1 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trbv30A0A0B4J1P1 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Trbv30A0A0B4J1P1 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trbv30A0A0B4J1P1 Gm6206-201ENSMUST00000133472 2199 ntBASIC18.24■□□□□ 0.51
Trbv30A0A0B4J1P1 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC18.24■□□□□ 0.51
Trbv30A0A0B4J1P1 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trbv30A0A0B4J1P1 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trbv30A0A0B4J1P1 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC18.23■□□□□ 0.51
Trbv30A0A0B4J1P1 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trbv30A0A0B4J1P1 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trbv30A0A0B4J1P1 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trbv30A0A0B4J1P1 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC18.22■□□□□ 0.51
Trbv30A0A0B4J1P1 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trbv30A0A0B4J1P1 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC18.21■□□□□ 0.51
Trbv30A0A0B4J1P1 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trbv30A0A0B4J1P1 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trbv30A0A0B4J1P1 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trbv30A0A0B4J1P1 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trbv30A0A0B4J1P1 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC18.2■□□□□ 0.5
Trbv30A0A0B4J1P1 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trbv30A0A0B4J1P1 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trbv30A0A0B4J1P1 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trbv30A0A0B4J1P1 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trbv30A0A0B4J1P1 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC18.17■□□□□ 0.5
Trbv30A0A0B4J1P1 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trbv30A0A0B4J1P1 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trbv30A0A0B4J1P1 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Trbv30A0A0B4J1P1 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
Trbv30A0A0B4J1P1 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trbv30A0A0B4J1P1 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trbv30A0A0B4J1P1 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trbv30A0A0B4J1P1 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trbv30A0A0B4J1P1 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trbv30A0A0B4J1P1 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Trbv30A0A0B4J1P1 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trbv30A0A0B4J1P1 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC18.14■□□□□ 0.49
Trbv30A0A0B4J1P1 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trbv30A0A0B4J1P1 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Trbv30A0A0B4J1P1 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trbv30A0A0B4J1P1 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC18.14■□□□□ 0.49
Trbv30A0A0B4J1P1 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trbv30A0A0B4J1P1 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC18.13■□□□□ 0.49
Trbv30A0A0B4J1P1 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trbv30A0A0B4J1P1 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trbv30A0A0B4J1P1 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trbv30A0A0B4J1P1 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trbv30A0A0B4J1P1 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trbv30A0A0B4J1P1 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trbv30A0A0B4J1P1 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC18.12■□□□□ 0.49
Trbv30A0A0B4J1P1 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trbv30A0A0B4J1P1 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trbv30A0A0B4J1P1 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trbv30A0A0B4J1P1 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trbv30A0A0B4J1P1 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trbv30A0A0B4J1P1 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trbv30A0A0B4J1P1 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trbv30A0A0B4J1P1 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trbv30A0A0B4J1P1 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trbv30A0A0B4J1P1 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trbv30A0A0B4J1P1 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trbv30A0A0B4J1P1 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trbv30A0A0B4J1P1 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trbv30A0A0B4J1P1 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Trbv30A0A0B4J1P1 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trbv30A0A0B4J1P1 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trbv30A0A0B4J1P1 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trbv30A0A0B4J1P1 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trbv30A0A0B4J1P1 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trbv30A0A0B4J1P1 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trbv30A0A0B4J1P1 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trbv30A0A0B4J1P1 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trbv30A0A0B4J1P1 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trbv30A0A0B4J1P1 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Trbv30A0A0B4J1P1 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trbv30A0A0B4J1P1 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Trbv30A0A0B4J1P1 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
Trbv30A0A0B4J1P1 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC18.05■□□□□ 0.48
Trbv30A0A0B4J1P1 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC18.05■□□□□ 0.48
Trbv30A0A0B4J1P1 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC18.04■□□□□ 0.48
Trbv30A0A0B4J1P1 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trbv30A0A0B4J1P1 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Trbv30A0A0B4J1P1 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC18.03■□□□□ 0.48
Trbv30A0A0B4J1P1 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trbv30A0A0B4J1P1 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Trbv30A0A0B4J1P1 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trbv30A0A0B4J1P1 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trbv30A0A0B4J1P1 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Trbv30A0A0B4J1P1 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trbv30A0A0B4J1P1 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trbv30A0A0B4J1P1 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trbv30A0A0B4J1P1 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trbv30A0A0B4J1P1 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trbv30A0A0B4J1P1 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trbv30A0A0B4J1P1 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trbv30A0A0B4J1P1 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Trbv30A0A0B4J1P1 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC18■□□□□ 0.47
Trbv30A0A0B4J1P1 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Trbv30A0A0B4J1P1 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trbv30A0A0B4J1P1 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms