Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trav17A0A075B655 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Trav17A0A075B655 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trav17A0A075B655 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trav17A0A075B655 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trav17A0A075B655 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trav17A0A075B655 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trav17A0A075B655 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Trav17A0A075B655 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trav17A0A075B655 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trav17A0A075B655 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trav17A0A075B655 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Trav17A0A075B655 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Trav17A0A075B655 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trav17A0A075B655 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Trav17A0A075B655 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Trav17A0A075B655 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
Trav17A0A075B655 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trav17A0A075B655 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
Trav17A0A075B655 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trav17A0A075B655 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Trav17A0A075B655 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trav17A0A075B655 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC19.11■□□□□ 0.65
Trav17A0A075B655 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trav17A0A075B655 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC19.11■□□□□ 0.65
Trav17A0A075B655 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Trav17A0A075B655 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Trav17A0A075B655 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Trav17A0A075B655 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trav17A0A075B655 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trav17A0A075B655 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trav17A0A075B655 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trav17A0A075B655 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Trav17A0A075B655 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trav17A0A075B655 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trav17A0A075B655 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Trav17A0A075B655 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trav17A0A075B655 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Trav17A0A075B655 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19.07■□□□□ 0.64
Trav17A0A075B655 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.06■□□□□ 0.64
Trav17A0A075B655 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Trav17A0A075B655 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trav17A0A075B655 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Trav17A0A075B655 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trav17A0A075B655 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.05■□□□□ 0.64
Trav17A0A075B655 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trav17A0A075B655 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trav17A0A075B655 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trav17A0A075B655 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Trav17A0A075B655 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Trav17A0A075B655 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Trav17A0A075B655 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trav17A0A075B655 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.04■□□□□ 0.64
Trav17A0A075B655 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Trav17A0A075B655 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trav17A0A075B655 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC19.02■□□□□ 0.64
Trav17A0A075B655 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Trav17A0A075B655 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav17A0A075B655 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav17A0A075B655 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav17A0A075B655 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trav17A0A075B655 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC19■□□□□ 0.63
Trav17A0A075B655 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
Trav17A0A075B655 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trav17A0A075B655 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trav17A0A075B655 Gm26115-201ENSMUST00000175605 87 ntBASIC18.99■□□□□ 0.63
Trav17A0A075B655 Gm8109-201ENSMUST00000194076 746 ntBASIC18.99■□□□□ 0.63
Trav17A0A075B655 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trav17A0A075B655 Pcf11-205ENSMUST00000208255 1720 ntBASIC18.98■□□□□ 0.63
Trav17A0A075B655 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trav17A0A075B655 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trav17A0A075B655 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trav17A0A075B655 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Trav17A0A075B655 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
Trav17A0A075B655 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trav17A0A075B655 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trav17A0A075B655 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav17A0A075B655 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav17A0A075B655 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trav17A0A075B655 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Trav17A0A075B655 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trav17A0A075B655 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trav17A0A075B655 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trav17A0A075B655 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trav17A0A075B655 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trav17A0A075B655 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trav17A0A075B655 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trav17A0A075B655 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Trav17A0A075B655 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trav17A0A075B655 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trav17A0A075B655 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trav17A0A075B655 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Trav17A0A075B655 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
Trav17A0A075B655 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC18.93■□□□□ 0.62
Trav17A0A075B655 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trav17A0A075B655 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trav17A0A075B655 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
Trav17A0A075B655 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Trav17A0A075B655 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC18.92■□□□□ 0.62
Trav17A0A075B655 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 9.4 ms